Query= MSMg01no291_l23.b1 MSMg01no291_l23.b1 CHROMAT_FILE:
MSMg01no291_l23.b1 PHD_FILE: MSMg01no291_l23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:26:37 2005
(453 letters)
>mm_chr18_85665184_85666038
Length = 855
Score = 822 bits (425), Expect = 0.0
Identities = 447/459 (97%), Gaps = 10/459 (2%)
Strand = Plus / Minus
Query: 1 ttttcttaatatgaaaaatggaaggttttttttccctattaaacatcaaggatattcatt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 549 ttttcttaatatgaaaaatggaaggttttttttccctattaaacatcaaggatattcatt 490
Query: 61 atctcctcttttaagaaaaggcttgatcccggaattagccatcctcagagtgagctgctg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 489 atctcctcttttaagaaaaggcttgatcccggaattagccatcctcagagtgagctgctg 430
Query: 121 cagcaccttccctgccgctctcctgtatcctacagctgctgaatgaggcatcttttactt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 429 cagcaccttccctgccgctctcctgtatcctacagctgctgaatgaggcatcttttactt 370
Query: 181 tccatttatgcatccctc----ttttccttaaaacaaactcatttcccatgatgactccc 236
|||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 369 tccatttatgcatccctcacag----ccttaaaacaaactcatttcccatgatgactccc 314
Query: 237 ttctaaattggcttaacactttcatttcatgacaatgttatgtttttaaagagcgagcac 296
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 313 ttctaaattggcttaacactttcatttcatgacaatgttatgtttttaaagagtgagcac 254
Query: 297 caatttgaatctattaatagaaattctaggg--ttttttttctttttctcctcttaataa 354
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 253 taatttgaatctattaatagaaattctagggttttttttttctttttctcctcttaataa 194
Query: 355 aaaataaaataataacagaaaagtagaaaaatagaatggaaagaaaacacatcaattaat 414
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 193 aaaataaaataataacagaaaagtagaaaaatagaatggaaagaaaacacatcaattaat 134
Query: 415 ttttttctacatgcaatgtgtgtgtgtgtgtgtgtgtgt 453
|||||||||||||||||||||||||||||||||||||||
Sbjct: 133 ttttttctacatgcaatgtgtgtgtgtgtgtgtgtgtgt 95
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 453
Length of database: 855
Length adjustment: 10
Effective length of query: 443
Effective length of database: 845
Effective search space: 374335
Effective search space used: 374335
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no291_l23.g1 MSMg01no291_l23.g1 CHROMAT_FILE:
MSMg01no291_l23.g1 PHD_FILE: MSMg01no291_l23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:26:37 2005
(234 letters)
>mm_chr18_85507366_85507999
Length = 634
Score = 429 bits (222), Expect = e-125
Identities = 225/226 (99%)
Strand = Plus / Plus
Query: 7 tatagcacctgtctgttgaggaagtcaccacagccatatctgtacctgtaatagtaaaca 66
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 207 tatagcacctgtctgttgaggaagtcaccacagccatatctgtacctgtaatagtaaaca 266
Query: 67 gacagataaaagccaacacattgggcactcatttgaggcaaaagcagttaaaatagaagg 126
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 gacagataaaagccaacacattgggcactcatttgaggcaaaagcagttaaaatagaagg 326
Query: 127 ttaaattagacacagtaagatacatatttatcatagtattagataatcatttttttcttt 186
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 ttaaattagacacagtaagatacatatttatcatagtattagataatcatttttttcttt 386
Query: 187 cggaaaatctctgaaggggtttgcaaccccataggaagaacaagaa 232
||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 387 cggaaaacctctgaaggggtttgcaaccccataggaagaacaagaa 432
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 234
Length of database: 634
Length adjustment: 9
Effective length of query: 225
Effective length of database: 625
Effective search space: 140625
Effective search space used: 140625
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
