Query= MSMg01no295_f22.b1 MSMg01no295_f22.b1 CHROMAT_FILE:
MSMg01no295_f22.b1 PHD_FILE: MSMg01no295_f22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:31:17 2005
(318 letters)
>mm_chr18_11348980_11349697
Length = 718
Score = 592 bits (306), Expect = e-173
Identities = 312/314 (99%)
Strand = Plus / Plus
Query: 4 ggaattcccatcataagatagagttttagctttcgatttcattgagatgttactaaaata 63
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 204 ggaattcccatcataagatagagttttagctttcgatttcgttgagatgttactaaaata 263
Query: 64 tgaaaactctcctgcttcctgaagaggaggactttctgtttactctttcagtggattgtt 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 tgaaaactctcctgcttcctgaagaggaggactttctgtttactctttcagtggattgtt 323
Query: 124 tttagtagtaatatctagaagctgcagtgaacttaaggagttaatgtcacccagaacaaa 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 tttagtagtaatatctagaagctgcagtgaacttaaggagttaatgtcacccagaacaaa 383
Query: 184 agaatgccaggggtcctttaaaagttcctctgctacagtagtgagaggacagcttcgttt 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 agaatgccaggggtcctttaaaagttcctctgctacagtagtgagaggacagcttcgttt 443
Query: 244 gtggagccattcataacaatccagcaacttgtaaaactttctggaaggtgagaatgagct 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 gtggagccattcataacaatccagcaacttgtaaaactttctggaaggtgagaatgagct 503
Query: 304 ggaaaggggtaaaa 317
|||||| |||||||
Sbjct: 504 ggaaagaggtaaaa 517
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 318
Length of database: 718
Length adjustment: 9
Effective length of query: 309
Effective length of database: 709
Effective search space: 219081
Effective search space used: 219081
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no295_f22.g1 MSMg01no295_f22.g1 CHROMAT_FILE:
MSMg01no295_f22.g1 PHD_FILE: MSMg01no295_f22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:31:17 2005
(295 letters)
>mm_chr18_11534116_11534813
Length = 698
Score = 530 bits (274), Expect = e-155
Identities = 289/294 (98%), Gaps = 3/294 (1%)
Strand = Plus / Minus
Query: 1 agttgggtcatgtaaaatctgagatgcccatgagactttcagtagagagttaatcttcta 60
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 494 agttgggtcatgtaaaatctgagatgcccaggagactttcagtagagagttaatcttcta 435
Query: 61 gaattt-aaaaaagaggtgataagtataagcttggaagatgccatataaagctataggaa 119
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 434 gaatttgaaaaaagaggtgataagtataagcttggaagatgccatataaagctataggaa 375
Query: 120 tgggttaaagcacatagaaaaacatacatggaaataaaagaagaagactacagagtctca 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 374 tgggttaaagcacatagaaaaacatacatggaaataaaagaagaagactacagagtctca 315
Query: 180 agaaatatcagtgtgtaaataagtttcagtcaagaagtgagaaaagagaactatc-aaaa 238
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 314 agaaatatcagtgtgtaaataagtttcagtcaagaagtgagaaaagagaactatcaaaaa 255
Query: 239 ttcaagagaagacatgataaccctct-tattaaaaactataaagtattacttga 291
||||||||||||||||| |||||||| |||||||||||||||||||||||||||
Sbjct: 254 ttcaagagaagacatgaaaaccctctctattaaaaactataaagtattacttga 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 295
Length of database: 698
Length adjustment: 9
Effective length of query: 286
Effective length of database: 689
Effective search space: 197054
Effective search space used: 197054
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
