Query= MSMg01no296_g10.b1 MSMg01no296_g10.b1 CHROMAT_FILE:
MSMg01no296_g10.b1 PHD_FILE: MSMg01no296_g10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:32:35 2005
(230 letters)
>mm_chr18_42284879_42285508
Length = 630
Score = 427 bits (221), Expect = e-124
Identities = 227/229 (99%)
Strand = Plus / Minus
Query: 1 caagtggctcctttctgtccctggcttctctggtgtcggtgccctacctaggagtcagga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 429 caagtggctcctttctgtccctggcttctctggtgtcggtgccctacctaggagtcagga 370
Query: 61 tgagaaagatgtcttggaaacagatacactggcgtttgcaacattatttgctatgtcagc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 369 tgagaaagatgtcttggaaacagatacactggcgtttgcaacattatttgctatgtcagc 310
Query: 121 agattttattgtgcaccaagctgtccagtttcccactagttgcttgattgttcagggtgg 180
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 309 agattttattgtgcaccaagctgtccattttcccactagttgcttgattgttcagggtgg 250
Query: 181 ggtatgataaaagaggaagaagggtggattattttctctcatatacatg 229
||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 249 ggtatgagaaaagaggaagaagggtggattattttctctcatatacatg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 230
Length of database: 630
Length adjustment: 9
Effective length of query: 221
Effective length of database: 621
Effective search space: 137241
Effective search space used: 137241
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no296_g10.g1 MSMg01no296_g10.g1 CHROMAT_FILE:
MSMg01no296_g10.g1 PHD_FILE: MSMg01no296_g10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:32:35 2005
(283 letters)
>mm_chr18_42096655_42097337
Length = 683
Score = 485 bits (251), Expect = e-142
Identities = 273/283 (96%), Gaps = 5/283 (1%)
Strand = Plus / Plus
Query: 1 ctgattctctcctgcttccatcatccaatatctagaattatggacctaagccaccaccat 60
||||||||||||||| |||||||| |||||||||||||||||||| | ||||||||||||
Sbjct: 201 ctgattctctcctgcctccatcattcaatatctagaattatggacatgagccaccaccat 260
Query: 61 ctctgtgtaatataaaaatgtcttgccgttcacaaattgatgtgtgttaaggatatagac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ctctgtgtaatataaaaatgtcttgccgttcacaaattgatgtgtgttaaggatatagac 320
Query: 121 aagtgagtttgggcaggctagtccctccatgttttagtttccttctgcattaagaaggac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aagtgagtttgggcaggctagtccctccatgttttagtttccttctgcattaagaaggac 380
Query: 181 tagacataattcctaccttaacattattcctcaggttgaatgaatccatgaaagtaggat 240
||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 381 -----ataattcctaccttaacattattcctcaggttgaatgaatctatgaaagtaggat 435
Query: 241 gtcagcatgttacctatacacttacacccagcctgaggcttac 283
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 436 gtcagcatgttacctatacacttacacccagcctgaggcttac 478
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 283
Length of database: 683
Length adjustment: 9
Effective length of query: 274
Effective length of database: 674
Effective search space: 184676
Effective search space used: 184676
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
