Query= MSMg01no305_k01.b1 MSMg01no305_k01.b1 CHROMAT_FILE:
MSMg01no305_k01.b1 PHD_FILE: MSMg01no305_k01.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:45:48 2005
(453 letters)
>mm_chr18_55455461_55456313
Length = 853
Score = 760 bits (393), Expect = 0.0
Identities = 402/405 (99%)
Strand = Plus / Plus
Query: 16 gaattctccgataattggcttcgccaagtcctgtacatttgctgctagtgtgtgtgaatt 75
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 216 gaattctccgataattggcttcgccaagtcctgtacatttgctgctagtgtgtgtgaatt 275
Query: 76 ctgtccagatctcagaggttggtggcatcccatacacttctgttttctctcttctagagc 135
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 276 ctgtccagatctcagaggttggtggcatcccatacacttctgttttctctcttctagagc 335
Query: 136 actgtgctagtccaccttctgggatctgataggatgatgactgctcttggatccttccac 195
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 336 actgtgctagtccaccttctgggatctgataggatgatgactgctcttggatccttccac 395
Query: 196 accctcagctagggtgtgtcaactcaccttcttcaataccgctgtgtgcaatgtctatca 255
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 396 accctcagctagggtgtgtcaactcaccttcttctataccgctgtgtgcaatgtctatca 455
Query: 256 ggagcttaaggcaacactgggggttaatattcctctgctgaagcaccttctagtcctcac 315
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 456 ggagcttaaggcaacactgggggttaatattcctctgctgaagcaccttctagtcctcac 515
Query: 316 tcaccggtctccagtaaacaagccattgctcatttttcctatttttgaggcttcttttaa 375
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 516 tcaccggtctccagtaaacaagccattgcttatttttcctatttttgaggcttcttttaa 575
Query: 376 cattatatggcacaactggtgcttagtcatgacctggaacatttt 420
||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 576 cattatatggcacaactggtgctgagtcatgacctggaacatttt 620
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 453
Length of database: 853
Length adjustment: 10
Effective length of query: 443
Effective length of database: 843
Effective search space: 373449
Effective search space used: 373449
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no305_k01.g1 MSMg01no305_k01.g1 CHROMAT_FILE:
MSMg01no305_k01.g1 PHD_FILE: MSMg01no305_k01.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:45:48 2005
(327 letters)
>mm_chr18_55639478_55640205
Length = 728
Score = 555 bits (287), Expect = e-162
Identities = 318/329 (96%), Gaps = 5/329 (1%)
Strand = Plus / Minus
Query: 1 acagagaagactaggcattaggcaaacttttcatctgtctcaagatgttgattcagaagc 60
|||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||
Sbjct: 527 acagagaagactaggcattaggtaaacttttcatccgtctcaagatgttgattcagaagc 468
Query: 61 agtggggtgtccttgagaatgac--agtttccttagaaaactcagccgtcatcaaagcca 118
||||||||||||||||||||||| ||||| ||||||||||||||||||||||||| |||
Sbjct: 467 agtggggtgtccttgagaatgacagagttttcttagaaaactcagccgtcatcaaa-cca 409
Query: 119 ccct-gagccagtggttcctgggttcttgtctcatgaagaatgaaatccatggcccaagg 177
||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 408 -cctcaagccagtggttcctcggttcttgtctcatgaagaatgaaatccatggcccaagg 350
Query: 178 ggtgaggtttatacagaaattttattttttattattcataggtaaaatcttaagaggaaa 237
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 349 ggtgaggtttatacagaaattttattttttattattcataggtaaaatcttaagaggaaa 290
Query: 238 aaaagagaaggcagaactcctgtatagcaggatgtgggttctaggaaatggggtactctg 297
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 289 aaaagagaaggcagaactcctgtatagcaggatgtgggttctaggaaatggggtactctg 230
Query: 298 aggtctggggaagattttggggactgctg 326
|||||||||||| ||||||||||||||||
Sbjct: 229 aggtctggggaatattttggggactgctg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 327
Length of database: 728
Length adjustment: 9
Effective length of query: 318
Effective length of database: 719
Effective search space: 228642
Effective search space used: 228642
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
