TATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGCCGCGGAA
TTCTCAGGGTCACTTTAATTATGATTTCTCTGATCACTAAGAGCCAAAGA
CTACATAACAAAACCCCAATTCTATATATATGAGAATCCATCCCTTGAGT
TGTTGGTTAGGGCTGTATAAGAAACTCCCAAAACATACAGCCTATATTGT
TCTCCTTGGTTGTGTCTCAATTTGTAAGGTAAGTCTCTATTGTTGAAGAC
ACCATCTACTTTAAGCAAAGCCTAGAAGCCAGTGAGCTGGAAATGACCTG
AATGCCTTCTCTTTGATTTATTGCTTTCATGATGAGAAAAGATACCATGG
AAGTTTCCAAAGGAGAGGGCAAACAGTCGTCTTGCCCAGTTATGATACCT
ATAGATGGCATTACCACCCACCGTGGCATAATACCTCTAAAAGTACAACA
GTGACCTTCATACTTGATAGCAATCAACATCTCTTTAATTGGACTTAAAC
CCTGCACAGCAAGTTGGAAACCATGCTTGGTACTGGAAAGATAGCCAACT
ATTCAGTGCTAGTGAAGTCATAGATATTGAATGAGAACCAACAATCACTA
ATGTACAAAGCCAGCATCATTCCTAAGAACAATCTAAACATTTGACCTTA
AACACACAGATAACAGATAAAATTATTTTCACCCCCACATCANAGAAACT
TCTCTTTGCAACTGATTGACACCACTACATAATACN

CGATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXCCCACAGACTTGAGGGGAGTGGCATTT
ATTTTCTGTTTTACCAATGAAGGTATCAGAATGAGCTTTGTGACCTGATA
TAAAGACCTCTTTAATCCAATCACTCTGCCCTTGCCAATTCTTAACACTC
ACGATCTTGTGAGAAATGGAGTTTTTGTATAGTCATTTCTACTTGCATTC
CAGTCCAATTCAAGGTTGCTTTGTACCAGGATTTCCAGAAATGGAAGAAG
GGGAAGCACTTAGTGACAGCATGCTCATGAGATTAAGAATTTAGAAGCGT
CTTGTACTACAATGTTAAAGTGTGACTACGCACATGGACTTTTACTACTA
GCCAAGCAAGGCACCCCACGGCTGGTTCCAAAGGCTTTCCTAACTCTAAC
ATGTGGTTCTGAAAGGTTTTTTTGTTTTTATGTGACGGAAAGAAACAAAG
AGACTACCTCTATTAGACCAAAATCCTCCATAATCAGTTGCTAATCTCAA
GATTTTAAAGGCACCTCATGTCTGGGCCACAGGACATGGAGAAATCAATC
CAGAACTGGATTGGAAGCTTTGTCCCACTGGATAGCCCTCACAGTGTCAG
AAGGTGCTATGGAAGCTAGTGGGGGAGAATTGTAATCAACAATTTGTTAA
GGTGTTGACCTCATATGCAACAATACTGATGAGCN

Query= MSMg01no315_e19.g1 MSMg01no315_e19.g1 CHROMAT_FILE:
MSMg01no315_e19.g1 PHD_FILE: MSMg01no315_e19.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:56:43 2005
         (662 letters)



>mm_chr18_30607135_30608189
          Length = 1055

 Score = 1112 bits (575), Expect = 0.0
 Identities = 635/663 (95%), Gaps = 17/663 (2%)
 Strand = Plus / Plus

                                                                       
Query: 4   acagacttgaggggagtggcatttattttctgttttaccaatgaaggtatcagaatgagc 63
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 acagacttgaggggagtggcatttattttctgttttaccaatgaaggtatcagaatgagc 263

                                                                       
Query: 64  tttgtgacctgatataaagacctctttaatccaatcactctgcccttgccaattcttaac 123
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||  
Sbjct: 264 tttgtgacctgatataaagacctctttaatccaatcactctgcccttgccaattcata-- 321

                                                                       
Query: 124 actcacgatcttgtgagaaatggagtttttgtatagtcatttctacttgcattccagtcc 183
                ||||||| |||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 322 -----cgatcttatgagaaatggagtttttgtatagtcagttctacttgcattccagtcc 376

                                                                       
Query: 184 aattcaaggttgctttgtaccaggatttccagaaatggaagaaggggaagcacttagtga 243
           |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 377 aattcaaggttgctttgtaccaggatttccagaaatagaagaaggggaagcacttagtga 436

                                                                       
Query: 244 cagcatgctcatgagattaagaatttagaagcgtcttgtactacaatgttaaagtgtgac 303
           ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 437 cagcatgctcatgagattaagaatttagaagtgtcttgtactacaatgttaaagtgtgac 496

                                                                       
Query: 304 tacgcacatggacttttactactagccaagcaaggcacccc----acggctggttccaaa 359
           ||| ||||||||||||||||||||||||||||||| |        | || ||||||||| 
Sbjct: 497 tacccacatggacttttactactagccaagcaaggta----tgggatggttggttccaa- 551

                                                                       
Query: 360 ggctttcctaactctaacatgtggttctgaaaggttttttt-gtttttatgtgacggaaa 418
           ||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||
Sbjct: 552 ggctttcctaactctaacatgtggttctgaaagtttttttttgtttttatgtgacggaaa 611

                                                                       
Query: 419 gaaacaaagagactacctctattagaccaaaatcctccataatcagttgctaatctcaag 478
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 612 gaaacaaagagactacctctattagaccaaaatcctccataatcagttgctaatctcaag 671

                                                                       
Query: 479 attttaaaggcacctcatgtctgggccacaggacatggagaaatcaatccagaactggat 538
           ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 672 attttaaaggcacctcatgtctgggccacaggacatggagaaatcaatcaagaactggat 731

                                                                       
Query: 539 tggaagctttgtcccactggatagccctcacagtgtcagaaggtgctatggaagctagtg 598
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 732 tggaagctttgtcccactggatagccctcacagtgtcagaaggtgctatggaagctagtg 791

                                                                       
Query: 599 ggggagaattgtaatcaacaatttgttaaggtgttgacctcatatgcaacaatactgatg 658
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 792 ggggagaattgtaatcaacaatttgttaaggtgttgacctcatatgcaacaatactgatg 851

              
Query: 659 agc 661
           |||
Sbjct: 852 agc 854


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 662
Length of database: 1055
Length adjustment: 10
Effective length of query: 652
Effective length of database: 1045
Effective search space:   681340
Effective search space used:   681340
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)