Query= MSMg01no315_m10.b1 MSMg01no315_m10.b1 CHROMAT_FILE:
MSMg01no315_m10.b1 PHD_FILE: MSMg01no315_m10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:57:21 2005
(374 letters)
>mm_chr18_23809694_23810469
Length = 776
Score = 654 bits (338), Expect = 0.0
Identities = 362/370 (97%), Gaps = 2/370 (0%)
Strand = Plus / Minus
Query: 6 gaattccagagtattccggaaaggtagggaaggaagagggaaaaaggcgcccacttaata 65
||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 575 gaattccagagtattccggaaaggtagggaaggaagagggaggaaggcgcccacttaata 516
Query: 66 ggcagga-cccgtgcaggagggcggtggagaggggcagggctgcggctgcctcctgtacc 124
||||||| |||||| ||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 515 ggcaggaccccgtggaggagggcggtggagaggggcggggctgcggctgcctcctgtacc 456
Query: 125 tggtaggcctcgtcctgcagcttctgcttcaggtactcctccagctgcagctcattctcc 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 455 tggtaggcctcgtcctgcagcttctgcttcaggtactcctccagctgcagctcattctcc 396
Query: 185 agctgccgcacagactcattctcataattgccatcctcgggttgcgtgtaaggatcccca 244
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 395 agctgccgcacagactcgttctcataattgccatcctcgggttgcgtgtaaggatcccca 336
Query: 245 tcttccgggaccctggg-aaaagcacaagaggtgtttgggagtaagtcctaatggagaag 303
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 335 tcttccgggaccctgggaaaaagcacaagaggtgtttgggagtaagtcctaatggagaag 276
Query: 304 agtgagtgggcttcctgggccgcttttgctttcttccctaatgtgttctgcctgaacacc 363
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 275 agcgagtgggcttcctgggccgcttttgctttcttccctaatgtgttctgcctgaacacc 216
Query: 364 cctagttcac 373
||||||||||
Sbjct: 215 cctagttcac 206
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 374
Length of database: 776
Length adjustment: 9
Effective length of query: 365
Effective length of database: 767
Effective search space: 279955
Effective search space used: 279955
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no315_m10.g1 MSMg01no315_m10.g1 CHROMAT_FILE:
MSMg01no315_m10.g1 PHD_FILE: MSMg01no315_m10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:57:21 2005
(346 letters)
>mm_chr18_23651143_23651888
Length = 746
Score = 615 bits (318), Expect = e-180
Identities = 333/338 (98%)
Strand = Plus / Plus
Query: 4 gaaggtgcctcatccagcataaggcagacagtggaaactgtgaaccaatgcagcactgtg 63
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 204 gaaggtgcctcatccagcataaggcagacagtggaaactgtgaagcaatgcagcactgtg 263
Query: 64 cattcagaataagaaagggaattcttcttaagaatgagttttcaagggactggggaaatg 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 cattcagaataagaaagggaattcttcttaagaatgagttttcaagggactggggaaatg 323
Query: 124 gttccattagcaaatttctctcctcgaggcatgaagacttgagtatgatttcaagaatca 183
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 324 gttccattagcaaatttctctcctcaaggcatgaagacttgagtatgatttcaagaatca 383
Query: 184 cgttgagaaaaccaactagcaacagaactcaggtgtggtgcggcccatgtttgcaatctc 243
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 384 cgttgagaaaaccaactagcaacagaactcaggtgtggtacggcccatgtttgcaatctc 443
Query: 244 agtgctgtggaggatggagatgggacaagcagatggactgggtaatgatggatccaggag 303
||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||
Sbjct: 444 agtgctgtggaggatggagatgggacaagcagatgaactgggtagtgatggatccaggag 503
Query: 304 ccaagcgcagccttgttctccctccagcttcctgtcag 341
||||||||||||||||||||||||||||||||||||||
Sbjct: 504 ccaagcgcagccttgttctccctccagcttcctgtcag 541
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 346
Length of database: 746
Length adjustment: 9
Effective length of query: 337
Effective length of database: 737
Effective search space: 248369
Effective search space used: 248369
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
