TATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA
ATTCATTGCAAAAATATCAAATTTTCCTACCATTGATACATTTCCATGCT
TACCTATACAACAATTTTTCATTTAATGTTATATTATGTTACAGTTATTT
CAAGTTGTTTTAAATGGGAAGTGTAGCATTTTGTAATAACTACCTCATCC
TAATAAAGGGAAAATTGTACAGCTATGAACAAACAAACATTGCTGCTCTT
CTACCAGCCTCAAGGTTTATTTAAAGAACAGATGGGTACGGGGAAAGTAA
TAACATGAACTTGTAAAAAAAAAACCAAATGTATGCTGGAGAAAGTTCTA
TTCTTTTCTTTGGACTCGTTTCTTGACCTTTTTGATTAATTCCTGTACTT
GTTTCTTACATTTTTTAAGTGCTCAGGGAATAGCCCTGTCGAATATCAGA
TTTGTCATAATATCATTAAGCACAAAAGGAGAAAACACTATAAATTTCCT
TAGGCAGTGGAAGCTATTGCTTGACTTATTATTAGGTTTTATTTGGTTTA
AGTTGAGTATATAGGGGTATAGCATTATTTTATGTCTTATGAATGAAAAA
GCACAAAATTTCAAACAGTAAAGTAAGTCACAAAAAAATCACAGAATTGA
AAACATTATTAAAATAGTCTATAAATTTAATTTTCATAGAGTAGATATAC
ATAGAAATATTGCTATACAATTAGACGAGCTTTTGCATATTT

TCCCGNCCCCCCCCCCCTTTTCCCCCCCCTTTTTTCCCTTTTCTTTTTCT
TACTTCTTTTTTTTTTCTTCTTTTTTTTACTTTATTCTTCTCTTTTATTT
TCCCCTTTTTTTTTTCTTTTCTTTCTTTCTTCTTTTTCTCTTTTTTTTCT
CTTNCNNANTTGTGGNNNGNNNNNNNNNNCCCTTCATAATGNACTTAGNT
GGGGGTTTANGNCCCTTGGGNCGGGNCCCGNCCCTTTTGTTCCCGTTTCG
NNACCATTTTTTANGGGTGNNACCACCTTTATTAGGAAATTTGTATTTCC
CGCCGGGGNAANTTTTTTCTTGNTTCCTTTCCTTTAAAGCCTTTTTTGCC
CCCTTTTAATTTCCCTTTGAAAATTTTTTCCAAGNCCAAGCCCAGTTTTT
TTTTTTTCCCCNTTCTCCTTTAATTTTCCAAGGTTTAAATTTTTTTTGGA
TTTTTTTTTTTTTTTTTTAAGAAATTTTTTTTTTAATAAACCCCCGGGAA
GAACCTTTTTTAACCCTTTTTTTATTTTTTTTTTTTTTTATATATTCGGG
GGGATTTTTTTTTTTTTTTTTTTAAAAAATTTTTTTTTTAACTATTTTTT
TTTTCTTCCAAAATGTTGTTTGTGTTTGTTTATATTCTCTCCCCCCCCTT
CTTTTTTTTTTTCCCCGTGGTGGGGGGTTTTTTTTTTTTTTTCCCCCCCC
TCTCCCCTTCTTCCAAAATTAAAGATCTCCCTCCCTCCTGGTTGTTTTTT
TTTTTTTCTTTCCCCTCCTTTTTTTTTTTTCTTTTCCTTTCCCTCCTCTT
TTTTTTTTTTTTTTCCTTTCTTTGTTGGTTGTGTTTTTTCTCCTTCCCCC
CCCACCCAACCTCTCTTTTTTTTGTTTATTTTTCCCTCCACCCTCTCTTT
TCCCTCTTTTTTTTTGTTTGGTCTTTTTGTTTTTTTTTTTTTCTCCTTCT
TTTTTTTTTCTTTTTCCTTTTCTTGTTTCTTGGTTTTCTTTTTTTTTTTT
TTTTTCTTTTTTCTTTTTTCTTTTCTTTCTTCT

Query= MSMg01no320_h14.b1 MSMg01no320_h14.b1 CHROMAT_FILE:
MSMg01no320_h14.b1 PHD_FILE: MSMg01no320_h14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:02:59 2005
         (602 letters)



>mm_chr18_19618892_19619888
          Length = 997

 Score = 1073 bits (555), Expect = 0.0
 Identities = 589/603 (97%), Gaps = 7/603 (1%)
 Strand = Plus / Plus

                                                                       
Query: 1   tttaatgttatattatgttacagttatttcaagttgttttaaatgggaagtgtagcattt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tttaatgttatattatgttacagttatttcaagttgttttaaatgggaagtgtagcattt 260

                                                                       
Query: 61  tgtaataactacctcatcctaataaagggaaaattgtacagctatgaacaaacaaacatt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgtaataactacctcatcctaataaagggaaaattgtacagctatgaacaaacaaacatt 320

                                                                       
Query: 121 gctgctcttctaccagcctcaaggtttatttaaagaacagatgggtacggggaaagtaat 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gctgctcttctaccagcctcaaggtttatttaaagaacagatgggtacggggaaagtaat 380

                                                                       
Query: 181 aacatgaacttgtaaaaaaaaaaccaaatgtatgctggagaaagttctattcttttcttt 240
           ||||||||||||||||||||     |||| ||||||||||||||||||||||||||||||
Sbjct: 381 aacatgaacttgtaaaaaaa-----aaat-tatgctggagaaagttctattcttttcttt 434

                                                                       
Query: 241 ggactcgtttcttgacctttttgattaattcctgtacttgtttcttacattttttaagtg 300
           |||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 435 ggactcctttcttgacctttttgattaattcctgtccttgtttcttacattttttaagtg 494

                                                                       
Query: 301 ctcagggaatagccctgtcgaatatcagatttgtcataatatcattaagcacaaaaggag 360
           |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 495 ctcagggaatagccctctcgaatatcagatttgtcataatatcattaagcacaaaaggag 554

                                                                       
Query: 361 aaaacactataaatttccttaggcagtggaagctattgcttgacttattattaggtttta 420
           |||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 555 aaaacactgtaaatttccttgggcagtggaagctattgcttgacttattattaggtttta 614

                                                                       
Query: 421 tttggtttaagttgagtatataggggtatagcattattttatgtcttatgaatgaaaaag 480
           |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 615 tttggttttagttgagtatataggggtatagcattattttatgtcttatgaatgaaaaag 674

                                                                       
Query: 481 cacaaaatttcaaacagtaaagtaagtcacaaaaaaa-tcacagaattgaaaacattatt 539
           |||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 675 cacaaaatttcaaatagtaaagtaagtcacaaaaaaaatcacagaattgaaaacattatt 734

                                                                       
Query: 540 aaaatagtctataaatttaattttcatagagtagatatacatagaaatattgctatacaa 599
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 735 aaaatagtctataaatttaattttcatagagtagatatacatagaaatattgctatacaa 794

              
Query: 600 tta 602
           |||
Sbjct: 795 tta 797


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 602
Length of database: 997
Length adjustment: 10
Effective length of query: 592
Effective length of database: 987
Effective search space:   584304
Effective search space used:   584304
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)