Query= MSMg01no321_g18.b1 MSMg01no321_g18.b1 CHROMAT_FILE:
MSMg01no321_g18.b1 PHD_FILE: MSMg01no321_g18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:04:09 2005
(293 letters)
>mm_chr18_63227986_63228681
Length = 696
Score = 482 bits (249), Expect = e-140
Identities = 281/293 (95%), Gaps = 3/293 (1%)
Strand = Plus / Minus
Query: 1 catgtgtcccatgcatggtttgacccttgtgacttgatagggggtcagagtgcaagagca 60
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 493 catgtgtcccatgcatggtttgacccttgtgacttgatagggggtcagagtgtaagagca 434
Query: 61 ctgctgtgct---gagtccctgggccccatggactcgttctttctgagtgattagcatga 117
|||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 433 ctgctgtgctaacgagtccctgggccccatggactcgttctttctgagaaattagcatga 374
Query: 118 tggctaaagctagccaaagatatgatgtagagagtattacgtaagaaagtgaagaacgaa 177
|||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 373 tggctaaaactagccaaagatatgatgtagagagtattacgtaagaaagtgaagaatgaa 314
Query: 178 atgtgctatctaaatctgtggtcaagagctttgctccttttccatgtgtggtttaaaacc 237
||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||
Sbjct: 313 gtgtgctatctaaatctgtggtcaagagctctgctccttttccatgtgttgtttaaaacc 254
Query: 238 cttaaggatacatttgtcccctgctgggactctgaaggatgactgctctgtta 290
|||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 253 cttaaggatacatttggcccctgctgggactctgaaggatgactgctctgtta 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 293
Length of database: 696
Length adjustment: 9
Effective length of query: 284
Effective length of database: 687
Effective search space: 195108
Effective search space used: 195108
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no321_g18.g1 MSMg01no321_g18.g1 CHROMAT_FILE:
MSMg01no321_g18.g1 PHD_FILE: MSMg01no321_g18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:04:09 2005
(342 letters)
>mm_chr18_63057991_63058732
Length = 742
Score = 646 bits (334), Expect = 0.0
Identities = 337/338 (99%)
Strand = Plus / Plus
Query: 1 tataaaaccgtggggggaaggaggagttgtaaataaacacattgaagtaaattgcagagc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tataaaaccgtggggggaaggaggagttgtaaataaacacattgaagtaaattgcagagc 260
Query: 61 aagggagttaagctgagcatcaaagggaaaccattacagaatgaaaacgaaggttaggaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aagggagttaagctgagcatcaaagggaaaccattacagaatgaaaacgaaggttaggaa 320
Query: 121 caccaagaacaaaacagagcaagcagtcaacccctaacctaaaagtctggctccaaagaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 caccaagaacaaaacagagcaagcagtcaacccctaacctaaaagtctggctccaaagaa 380
Query: 181 tccggttaaatgtaaagagaacacgatgcctattaaagagtgtagtgaaaagaaaaaagg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tccggttaaatgtaaagagaacacgatgcctattaaagagtgtagtgaaaagaaaaaagg 440
Query: 241 caacaggataaattctgaaaatatccaaagtcacaacaggaaagaaaatgtctcctgaga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 caacaggataaattctgaaaatatccaaagtcacaacaggaaagaaaatgtctcctgaga 500
Query: 301 tgtagagagatggggacttccagttcatgattcccaga 338
|||||||||| |||||||||||||||||||||||||||
Sbjct: 501 tgtagagagagggggacttccagttcatgattcccaga 538
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 342
Length of database: 742
Length adjustment: 9
Effective length of query: 333
Effective length of database: 733
Effective search space: 244089
Effective search space used: 244089
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
