Query= MSMg01no323_b05.b1 MSMg01no323_b05.b1 CHROMAT_FILE:
MSMg01no323_b05.b1 PHD_FILE: MSMg01no323_b05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:06:13 2005
(658 letters)
>mm_chr18_44480716_44481773
Length = 1058
Score = 1216 bits (629), Expect = 0.0
Identities = 650/657 (98%)
Strand = Plus / Plus
Query: 1 tattgctataattctgggtccaaaaaaccttgaaacaccacaaagtggaaaaacatcttt 60
|||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||
Sbjct: 201 tattgctataattctgggtccaaaaaacgttgtaacaccacaaagtggaaaaacatcttt 260
Query: 61 aaaaaaaagaaatgactgttggaatatatatttgcttttagagccataaccctctatgta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aaaaaaaagaaatgactgttggaatatatatttgcttttagagccataaccctctatgta 320
Query: 121 tgaaatcctactactccataggccctatgctatgagaagtcaggattctgtgaatggaca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgaaatcctactactccataggccctatgctatgagaagtcaggattctgtgaatggaca 380
Query: 181 gaactgatagcatgaatgtatgttaaagtgtattagactggcttacatgatatggtctgg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gaactgatagcatgaatgtatgttaaagtgtattagactggcttacatgatatggtctgg 440
Query: 241 atagtccaacagctgtttcattctggaaagactaagaatccacaagcccagctgtctcag 300
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 441 atagtccaacagctgtttcattctggaaagactaagaatccacaagtccagctgtctcag 500
Query: 301 cagtcctggtctggtgccaaatttctggaggacccctagagagaaggttctaatatcagt 360
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 501 cagtcctggtctggtgccaaaggcctggaggacccctagagagaaggttctaatatcagt 560
Query: 361 gaaggaatgtctcaacagcaggatggacgaacttgccaccaagactgaggacaaccagtc 420
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 561 gaaggaatgtctcaacagcaggatggatgaacttgccaccaagactgaggacaaccagtc 620
Query: 421 agaaaaccagtggccttctttcatgtccttttatatgagctgccaacagaaaaggctgcc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 agaaaaccagtggccttctttcatgtccttttatatgagctgccaacagaaaaggctgcc 680
Query: 481 ctcatttagcgtaggtcttcctgtttcaaatgatctaatcaagaaatctcacacaagagt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 ctcatttagcgtaggtcttcctgtttcaaatgatctaatcaagaaatctcacacaagagt 740
Query: 541 gcccagttgcttgtgttttagttgttacagtcaagtggacaatcaaaaatcaaccatcac 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 gcccagttgcttgtgttttagttgttacagtcaagtggacaatcaaaaatcaaccatcac 800
Query: 601 agagccagatgagtcttgcagttggtattttaaaatcattttgattcctttccagca 657
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 agagccagatgagtcttgcagttggtattttaaaatcattttgattcctttccagca 857
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 658
Length of database: 1058
Length adjustment: 10
Effective length of query: 648
Effective length of database: 1048
Effective search space: 679104
Effective search space used: 679104
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no323_b05.g1 MSMg01no323_b05.g1 CHROMAT_FILE:
MSMg01no323_b05.g1 PHD_FILE: MSMg01no323_b05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:06:14 2005
(618 letters)
>mm_chr18_44648214_44649230
Length = 1017
Score = 1122 bits (580), Expect = 0.0
Identities = 608/622 (97%), Gaps = 9/622 (1%)
Strand = Plus / Minus
Query: 1 cacgtctgagtacatacatatttctgtcaaaatatgtatcatttttacccagttgtgtgt 60
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 817 cacgtctgagtacatacacatttctgtcaaaatatgtatcatttttacccagttgtgtgt 758
Query: 61 gctgctgttatactttctgaaaatttatataatgtacacatctcatttatcttcaaatga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 757 gctgctgttatactttctgaaaatttatataatgtacacatctcatttatcttcaaatga 698
Query: 121 caaaatctgaagtgatgtgtgtttcttcaaacatcctctggaatttgtatgtttacccaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 697 caaaatctgaagtgatgtgtgtttcttcaaacatcctctggaatttgtatgtttacccaa 638
Query: 181 gagttggattaactttttttatttctaaacaattatgaatcttaaagaattttctaggct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 637 gagttggattaactttttttatttctaaacaattatgaatcttaaagaattttctaggct 578
Query: 241 cttttgaatgccacttttgtagactttaaatact----gtttttacttccaccccaccat 296
|||||||||||||||||||||||||||||||||| | ||||||||||||||||
Sbjct: 577 cttttgaatgccacttttgtagactttaaatactggaag-----acttccaccccaccat 523
Query: 297 tacccagcatatgtcatttccccgaagagggatcagtctcttgtggtcttctgtttgcat 356
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 522 tacccagcatatgtcatttccccgaagagggatcagtctcttgtggtcttctgtttgcat 463
Query: 357 gttctgcagcctcagagagcaaataaggttcaatttcgtgtttgtctctgggagtctgca 416
||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 462 gttctacagcctcagagagcaaataaggttcaatttcgtgtttgtctctgggactctgca 403
Query: 417 gagtacatggatgttttgtctttctgtttctgttgctgctttgggatcccagttcatcag 476
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 402 gagtacatggatgttttgtctttctgtttctgttgctgctttgggatcccagttcatcag 343
Query: 477 catggcctgaaaaacaactgggaccacagtttttttcctttgtcgatctttattgctcag 536
||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 342 catggcctgaaaagcaactgggaccacagtttttttcctttgtccatctttattgctcag 283
Query: 537 actttgaccagatcaatgaaattggtgcatggcccctgcctgtaattaagccaagtgctc 596
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 282 actttgaccagatcaatgaaattggtgcatggcccctgcctgtaattaagccaagtgctc 223
Query: 597 tccataggtcttctgagccttg 618
||||||||||||||||||||||
Sbjct: 222 tccataggtcttctgagccttg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 618
Length of database: 1017
Length adjustment: 10
Effective length of query: 608
Effective length of database: 1007
Effective search space: 612256
Effective search space used: 612256
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
