TCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCTCACTTTCTCATTAAAATATAAGCACAGCACCCTGCATTTAAATA
TATTAATACAATGAGATGGGAAGATGGCTCAGCAGTTAAGAACACTGGAT
GCTCGTCCATAGGAATAAGTTCTGATTCCTGGTAGCCACAAGGAGCTTAT
AACTGTTTGTATCTCCAATCCTAGGTAATTTGCCCTCTTCTGACCTCCAT
GGACACCAGGCACACATATAATGACATACATGCATGCAAGAAACATCCAC
AAAAAATAAAAATAAATTATATTAAATTGACATGATGTCAGATTAACCTG
ATTCAAAATTGTGAATTTTTCGAGACACATACTTACACTTAGACTTTTAT
TTTGATTTTTATTCAATTATTTAATATGCACAACTCATATTTATAATATA
CATATTAATATGGCAGACTTAAAGCTGCCATCTTACCATTAATTTTCTAT
ATTTTCATTTGCAGTTTGCTCAATTTTGTTTTTGGATTATTTGCATCTCT
ATCTTCATTTTGATTTTTGATTATTTTTGTGCCATTTGTTAATTCACCTA
ATATATGCCTTTGATTTATGACATATGCTTAAGTAAGATTTGTGTCTAGA
ATACAGAACAGGAATATGTATGTATTTATCATGATGCAGGATAGAGTTAT
GTTTAACAATATGGCTGTTTATGATTTCATAATAC

CGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXTTTGTTTACCTCTGAGCCCCATTT
TTAACGGGGTTATTTGATTTTCTGGAGTCCACCTTCTTGAGTTCTTTATA
TATATTGGATATTAGTCCCCTATCTGATTTAGGATAGGTAAAGATACTTT
CCCAATCTGTTGGTGGCCTTTTTGTCTTTTGCCTTACACCCAAGATACAA
GATACAATTTGCAAAACACATGAAACTCAAGAGGAACTAAGACCAAAGTA
TGGACACTTTGCCCCTTCTTAGAACTGGGAACAAAACACCCACGGTAGGA
GTTACAGACACAAAGTTTGGAGCCGAGATGAAAGGATGGACCATCTAGAG
ACTGTCATCCCCGGGGATCCCTCTCATAATCAGCCTCCAAACGCTGACAC
CATTGCATACACCAGCAAGATTTTGCTGAAAGGACCCTGATATAGCTGTC
TCTTGAGAGGCTATGCTGGTGCCTGGCAAACACAGAAGTGGATGCTCACA
GTCAGCTATTGGATGGATCACAGGGCCCCAAATGGAGGAGCTAGAGAGAG
TGCCAAGGAGCTAAAGGGGTCTGCAACCCTAAAGGTGGAACACCAGCATG
AATTATTCATTACCCCCCTTAGCTCGTGTCTCCAGTTGTTTATGTATTAG
CCTACTATGTCTCTATTGTAAATATTATTCCG

Query= MSMg01no329_d11.b1 MSMg01no329_d11.b1 CHROMAT_FILE:
MSMg01no329_d11.b1 PHD_FILE: MSMg01no329_d11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:14:35 2005
         (690 letters)



>mm_chr18_51721804_51722896
          Length = 1093

 Score = 1071 bits (554), Expect = 0.0
 Identities = 601/622 (96%), Gaps = 12/622 (1%)
 Strand = Plus / Minus

                                                                        
Query: 81   ggctcagcagttaagaacactggatgctcgtccataggaataagttctgattcctggtag 140
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1093 ggctcagcagttaagaacactggatgctcgtccataggaataagttctgattcctggtag 1034

                                                                        
Query: 141  ccacaaggagcttataactgtttgtatctccaatcctaggtaatttgccctcttctgacc 200
            ||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||
Sbjct: 1033 ccacaaggagcttataactgtttttaactccaatcctaggtaatttgccctcttctgacc 974

                                                                        
Query: 201  tccatggacaccaggcacacatataatgacatacatgcatgcaagaaac--atccaca-- 256
            |||||||||||||||||||||||||||||||||||||||||||||||||  |||||||  
Sbjct: 973  tccatggacaccaggcacacatataatgacatacatgcatgcaagaaacttatccacata 914

                                                                        
Query: 257  -----aaaaataaaaataaattatattaaattgacatgatgtcagattaacctgattc-a 310
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 913  aaaataaaaataaaaataaattatattaaattgacatgatgtcagattaacctgattcaa 854

                                                                        
Query: 311  aaattgtgaatttttcgagacacatacttacacttagacttttattttgatttttattca 370
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 853  aaattgtgaatttttcgagacacatacttacacttagacttttattttgatttttattca 794

                                                                        
Query: 371  attatttaatatgcacaactcatatttata--atatacatattaatatggcagacttaaa 428
            ||||||||||||||||||||||||||||||  ||||| ||||||||||||||||||||||
Sbjct: 793  attatttaatatgcacaactcatatttataatatatatatattaatatggcagacttaaa 734

                                                                        
Query: 429  gctgccatcttaccattaattttctatattttcatttgcagtttgctcaattttgttttt 488
            ||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||
Sbjct: 733  gctgccatcttaccattaattttctatatttttgtttgcagtttgctcaattttgttttt 674

                                                                        
Query: 489  ggattatttgcatctctatcttcattttgatttttgattatttttgtgccatttgttaat 548
            |||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||
Sbjct: 673  ggattatttgcatctctatctttattttgatttttgattatttttgtgccgtttgttaat 614

                                                                        
Query: 549  tcacctaatatatgcctttgatttatgacatatgcttaagtaagatttgtgtctagaata 608
            |||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||
Sbjct: 613  tcacctaatatatgcctttgatttatgagatatgcttaagtaatatttgtgtctagaata 554

                                                                        
Query: 609  cagaacaggaatatgtatgtatttatcatgatgcaggatagagttatgtttaacaatatg 668
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 553  cagaacaggaatatgtatgtatttatcatgatgcaggatagagttatgtttaacaatatg 494

                                  
Query: 669  gctgtttatgatttcataatac 690
            ||||||||||||||||||||||
Sbjct: 493  gctgtttatgatttcataatac 472


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 5
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 690
Length of database: 1093
Length adjustment: 10
Effective length of query: 680
Effective length of database: 1083
Effective search space:   736440
Effective search space used:   736440
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)