CTCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXATGCGAGAAAATCCGCG
GAATTCACTACAGTTACAGTCAGGACCTTCCCACAAACAACTGGAGAAAA
AGTTTTCCAACCTTCCTGGCATTTGAACAGTTTTCATGCTGCAGATACCA
TGTGTCCCCAGGAAAGCTGTTACAGAGGTGAAATGACTGATATTTGATGG
CTGCAATCCTTTATACAGTCCCAAAGGAGCTCAGATAAGGGTTGGGCAGA
CTGCTGAGGAAGAGAGAAAGACGCCCTAAAGACTGCCGTTCACACATAGT
TCTGAACTCATGCTCCCATACTCAGGTCCTGTACTAGTGAGATCAAAGAC
CCTGGAAACGGAGTCCTGGACAACTGCCCCGGAGGCAACAGCTAAGTCTA
AGTGGGCAGCCTTAGAGCCCCCATGCATATCCTCTAAGGGCCCATGTGTT
GAAAAGTTGCTCTCTGTTCCACAGCACCATCTGGAGGTGGTAGAATCACT
AGGAGGTAGGGATCTAGTTAATGGAAGTTAGGTCCTGGGGCCCTATACCT
TCCTGTTTTCCCCTTCCCTCCTGGCAGCCAAGTAAGAACATCCTCTACAA
CACTCTCCCACCATGGCATCTTGCATCATTCCAGACCCAAGAGAAGCAAA
GTTATCCAATCCTGGACTGAAGCCTTTGAAACTGTGAACCAAGCTAAACC
TCTCCTGTTTGTAGGTTTGTAGGGACAGA

CATGATAGTGGAGGCCGGGGACGNCTGTTTCCCACCCGANNGAANNANAG
AAGTGGCGGGACCCGAGGNNANNNNCACAGNGANNGCCACCACAAAGGAG
GNCTTTTCCCCCCACAAAGCAGGAAGGACACAGGAGCAGANGNAGAGGGA
AGGGAGGAGAGAAACGGAGGGGGNNCNCCGGGCNGGCCCAGCCAGCAGNC
AAAAGGAACCCAAGACGACCAACCCAGAGACGCCACTTTTTTGACGGGGC
CCCCACACCCGAGACCCCGCGGAGAAAACGCCCCACAGCCGGCCCCCCCG
TTCTTTCATGGTTCTCCNGACCCCCCGCGGCCCCGCGAAAACGAAAGAAA
TGCGACCCCCCCCCCCGGCGAGAAGAAAGAGAAAAACCCCGCCAAGAACA
AAGAACCCACCCCCCCGGGAAAAAACCAGAAACCCCGGACCACCCACCAA
CACCCCCCCCGAGAACACGCCCCCCCCGCCAACGCGCCACACCAAACACG
CCGCACGCACGAAGCCGACCCCAGCGAAAACCGCACACGCAACCACCACC
CACCGCAAAAAGAAAACAACACCCCCCCAACACGGCCACAAACCACACAC
GCACCCCACCCCGCAACAGACCCCACCACCCGACCCCGCCGAAAACAACC
CCCCGCCCCCCCCCGCCCCAAGAGCAACGCCCCCCAAGCGCACACCGCAC
GCCCCATTTTTTTTTTTTTTTTTTTCTTTTTCACCATACAATGTATTTCC
CCTACTCCACTCTTTTTTTTTCTTTTCTCTCCCCTGTATTTGTTTCCCTC
CACCCCG

Query= MSMg01no331_b05.b1 MSMg01no331_b05.b1 CHROMAT_FILE:
MSMg01no331_b05.b1 PHD_FILE: MSMg01no331_b05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:16:55 2005
         (568 letters)



>mm_chr18_63474154_63475122
          Length = 969

 Score =  971 bits (502), Expect = 0.0
 Identities = 552/574 (96%), Gaps = 11/574 (1%)
 Strand = Plus / Plus

                                                                       
Query: 1   ggaccttcccacaaacaactggagaaaaagttttccaaccttcctggcatttgaacagtt 60
           ||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 201 ggaccttcccataaacaactggagaaaaagttttccaaccttcctagcatttgaacagtt 260

                                                                       
Query: 61  ttcatgctgcagataccatgtgtccccaggaaagctgttacagaggtgaaatgactgata 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttcatgctgcagataccatgtgtccccaggaaagctgttacagaggtgaaatgactgata 320

                                                                       
Query: 121 tttgatggctgcaatcctttatacagtcccaaaggagctcagataagggttgggcagact 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tttgatggctgcaatcctttatacagtcccaaaggagctcagataagggttgggcagact 380

                                                                       
Query: 181 gctgaggaagagagaaagacgccctaaagactgccgttcacacatagttctgaactcatg 240
           |||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 381 gctgtggaagagagaaagacgccctaaagactgccattcacacatagttctgaactcatg 440

                                                                       
Query: 241 ctcccatactcaggtcctgtactagtgagatcaaagaccctggaaacggagtcctggaca 300
           |||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||
Sbjct: 441 ctcccatactcaggtcctgttctagtgaggtcaaagaccctggaaacggagtcctggaca 500

                                                                       
Query: 301 actgccccggaggcaacagctaagtctaagtgggcagccttagagccccc-----atgca 355
           ||||||| |||||||||||||||||||||||||||||||||||||          ||| |
Sbjct: 501 actgccctggaggcaacagctaagtctaagtgggcagccttagag-----tgtggatgga 555

                                                                       
Query: 356 tatcctctaagggcccatgtgttgaaaagttgctctctgttccacagcaccatctggagg 415
           |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 556 tatcctctaagggcccatgtgttgaaaagttgctctttgttccacagcaccatctggagg 615

                                                                       
Query: 416 tggtagaatcactaggaggtagggatctagttaatggaagtt-aggtcctggggccctat 474
           |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 616 tggtagaatcactaggaggtagggatctagttaatggaagtttaggtcctggggccctat 675

                                                                       
Query: 475 accttcctgttttccccttccctcctggcagccaagtaagaacatcctctacaacactct 534
           ||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||
Sbjct: 676 accttcctgttttccccttccttcctggcagccaagtaagagcatcctctacaacactct 735

                                             
Query: 535 cccaccatggcatcttgcatcattccagacccaa 568
           ||||||||||||||||||||||||||||||||||
Sbjct: 736 cccaccatggcatcttgcatcattccagacccaa 769


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 568
Length of database: 969
Length adjustment: 10
Effective length of query: 558
Effective length of database: 959
Effective search space:   535122
Effective search space used:   535122
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)