Query= MSMg01no331_f15.b1 MSMg01no331_f15.b1 CHROMAT_FILE:
MSMg01no331_f15.b1 PHD_FILE: MSMg01no331_f15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:17:14 2005
(373 letters)
>mm_chr18_61746447_61747217
Length = 771
Score = 675 bits (349), Expect = 0.0
Identities = 362/367 (98%), Gaps = 2/367 (0%)
Strand = Plus / Plus
Query: 5 gaattcattagagcttcctattatgtaatctcttattagatggtgtacacagaaattcat 64
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcattagagctttctattatgtaatctcttattagatggtgtacacagaaattcat 264
Query: 65 gcatttactctagttagaatcatattctagcgctgcagtaatatctatttttcattgctt 124
|||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||
Sbjct: 265 gcatttactctagttagaatcatattctagtgctgcagtaatatc--tttttcattgctt 322
Query: 125 gttgggttttttaaatttagtgtgttcttggtatcaaagaagaagaattgggcatcctct 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 gttgggttttttaaatttagtgtgttcttggtatcaaagaagaagaattgggcatcctct 382
Query: 185 tgtgactgtaacaactctgatatagcttagggttgggtgctgaggctctgattgattata 244
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 383 tgtgactgtaacaactctgatatagcttagggttgggtgctgaggccctgattgattata 442
Query: 245 gactgcttcctgggttattcagagtgaggctggggagtggctttaatcagagatgcatgt 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 gactgcttcctgggttattcagagtgaggctggggagtggctttaatcagagatgcatgt 502
Query: 305 actgccttgtgaaagtttaggttggtgattttccagataaaaacacagcatttccaagtg 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 actgccttgtgaaagtttaggttggtgattttccagataaaaacacagcatttccaagtg 562
Query: 365 attattg 371
|||||||
Sbjct: 563 attattg 569
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 373
Length of database: 771
Length adjustment: 9
Effective length of query: 364
Effective length of database: 762
Effective search space: 277368
Effective search space used: 277368
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no331_f15.g1 MSMg01no331_f15.g1 CHROMAT_FILE:
MSMg01no331_f15.g1 PHD_FILE: MSMg01no331_f15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:17:14 2005
(247 letters)
>mm_chr18_61916865_61917511
Length = 647
Score = 435 bits (225), Expect = e-126
Identities = 237/241 (98%)
Strand = Plus / Minus
Query: 1 gtaagttccctcttagccctgaaccatccctctaacgcacacgtgttcacatgcatgtac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gtaagttccctcttagccctgaaccatccctctaacgcacacgtgttcacatgcatgtac 382
Query: 61 acaaaggtgtctcttgctgctcttggctttcacacagagccattaggcctccttgggggt 120
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 381 acaaaggtgtctcttgctgctcttggctttcacacagagccattaggtctccttgggggt 322
Query: 121 cctgggccctggcagctctgtaagctgcctgaatctgtagggaaggactcaccccaatct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 321 cctgggccctggcagctctgtaagctgcctgaatctgtagggaaggactcaccccaagct 262
Query: 181 tgcaggagtaaacgtgcaagccagatagcccagcccagggtggtcaccttacagccattg 240
||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 261 tgcaggagtgaacgtgcaagccagatagcccaacccagggtggtcaccttacagccattg 202
Query: 241 c 241
|
Sbjct: 201 c 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 247
Length of database: 647
Length adjustment: 9
Effective length of query: 238
Effective length of database: 638
Effective search space: 151844
Effective search space used: 151844
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
