Query= MSMg01no333_b20.b1 MSMg01no333_b20.b1 CHROMAT_FILE:
MSMg01no333_b20.b1 PHD_FILE: MSMg01no333_b20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:20:12 2005
(652 letters)
>mm_chr18_68796831_68797882
Length = 1052
Score = 1222 bits (632), Expect = 0.0
Identities = 647/652 (99%)
Strand = Plus / Plus
Query: 1 tcctaaaatgtccagaacttccaaaaagatagccactacctaggaaccaagtacttaaca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tcctaaaatgtccagaacttccaaaaagatagccactacctaggaaccaagtacttaaca 260
Query: 61 catgaacctgtaagggacttttcatagaaacaatgtgagcctgtgagggactggtcatag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 catgaacctgtaagggacttttcatagaaacaatgtgagcctgtgagggactggtcatag 320
Query: 121 catcatttcttcaataatttcagaaagaattccaggaaagctctgcattaatttcctagt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 catcatttcttcaataatttcagaaagaattccaggaaagctctgcattaatttcctagt 380
Query: 181 gtcacttagaccaaatactgagtaaccaagcactacacaccgagtagccaagtagtacat 240
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 381 gtcacttagaccaaatactgagtaaccaagcactacacaccgagtagccatgtagtacat 440
Query: 241 agtgagtattctggcacaactggagaacttttttggctccctgttctagtggtcactttg 300
|||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 agtgagtagcctggcacaactggagaacttttttggctccctgttctagtggtcactttg 500
Query: 301 gtccaagttcaaggttctgtctggatttgaaggtaccagggatggatgcagtccaggctg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gtccaagttcaaggttctgtctggatttgaaggtaccagggatggatgcagtccaggctg 560
Query: 361 ctctcctggatggatgtgtgcttaggcatcccttggtttgggcatccatctcacctagcc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ctctcctggatggatgtgtgcttaggcatcccttggtttgggcatccatctcacctagcc 620
Query: 421 atcatcttagatgtctcctcctcattttccctcaatgtctatcttttgtgactcacattc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 atcatcttagatgtctcctcctcattttccctcaatgtctatcttttgtgactcacattc 680
Query: 481 tcctgttccaagttgcttgttcctgtaaagatcctatttccaaataagaccacactttga 540
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 681 tcctgttccaagttgcttgttcctgtaaagagcctatttccaaataagaccacactttga 740
Query: 541 gatagtggcgcgggactccatgccttgctgttgttgttgagataaacattaactcataat 600
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 741 gatagtggcgcgggactccatgccttgctgttgttgttgagataaacattagctcataat 800
Query: 601 acataccctaagcgtttatatttttacttcttagcagaggatctgaagagtt 652
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 acataccctaagcgtttatatttttacttcttagcagaggatctgaagagtt 852
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 652
Length of database: 1052
Length adjustment: 10
Effective length of query: 642
Effective length of database: 1042
Effective search space: 668964
Effective search space used: 668964
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no333_b20.g1 MSMg01no333_b20.g1 CHROMAT_FILE:
MSMg01no333_b20.g1 PHD_FILE: MSMg01no333_b20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:20:13 2005
(345 letters)
>mm_chr18_68952126_68952869
Length = 744
Score = 617 bits (319), Expect = 0.0
Identities = 337/345 (97%), Gaps = 5/345 (1%)
Strand = Plus / Minus
Query: 1 atcagccacacacccaggaagcaaggggctcctctgattccctaagatgagctagtgtta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 498 atcagccacacacccaggaagcaaggggctcctctgattccctaagatgagctagtgtta 439
Query: 61 tcctctgccctgcatccactgccttctagatttcagtcctgtctggcccatgtgaagagt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 438 tcctctgccctgcatccactgccttctagatttcagtcctgtctggcccatgtgaagagt 379
Query: 121 atctaggtgagtacagaaggagggaggtgagcagaaagagggaacaagagaaggagccag 180
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 atctaggtgagtacagagggagggaggtgagcagaaagagggaacaagagaaggagccag 319
Query: 181 catcaaagaggaagagtacagcacttgctcggtctcagaggtaattgggtcacatgctct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 318 catcaaagaggaagagtacagcacttgctcggtctcagaggtaattgggtcacatgctct 259
Query: 241 actgggtaggtgtgaaaatctccagtctacaaatggaaaagaaaaaccgactaagggaat 300
|||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||
Sbjct: 258 actgggtaggtgtgaaaatctccagtttacaaatggaaaa-aaaaaccgactaagggaac 200
Query: 301 tcagtgtgtgtgtggtgtgtgtgtgtgagtgtgtgtatgtgtttg 345
||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 199 tcagtgtgtgtgtggtgtgtgtgtgtg----tgtgtatgtgtttg 159
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 41
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 345
Length of database: 744
Length adjustment: 9
Effective length of query: 336
Effective length of database: 735
Effective search space: 246960
Effective search space used: 246960
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
