Query= MSMg01no333_g17.b1 MSMg01no333_g17.b1 CHROMAT_FILE:
MSMg01no333_g17.b1 PHD_FILE: MSMg01no333_g17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:20:35 2005
(675 letters)
>mm_chr18_83813640_83814715
Length = 1076
Score = 1201 bits (621), Expect = 0.0
Identities = 663/677 (97%), Gaps = 2/677 (0%)
Strand = Plus / Plus
Query: 1 ttcattaaactgta-ctcatattcctctcagccctgtgaagaccaagtgacaagtctgag 59
|||||||||||| | |||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 200 ttcattaaactgaaggtcattttcctctcagccctgtgaagaccaagtgacaagtctgag 259
Query: 60 agaaaacttggcattgtccctggacagagtgaagtgcctgtggagacagaaatgcagatg 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 agaaaacttggcattgtccctggacagagtgaagtgcctgtggagacagaaatgcagatg 319
Query: 120 tactatgcagctggacagtttgcgccaataccacgatcccactacttccatatgcccttg 179
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 320 tactatgcagctggacagtttgcgccaataccatgatcccactacttccatatgcccttg 379
Query: 180 gagttcccaaaaccccatgtgaccccctaagatggcaccgcagagacaaatgtgttgtcc 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 gagttcccaaaaccccatgtgaccccctaagatggcaccgcagagacaaatgtgttgtcc 439
Query: 240 agggctaaacaaacattgcttgtctcccgcacctctgacctgtcccagctgtgtgaccct 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 agggctaaacaaacattgcttgtctcccgcacctctgacctgtcccagctgtgtgaccct 499
Query: 300 tgaacaagtctttaacctcttacggtcacatggattcccaatgtcaaatcttatctgcca 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 tgaacaagtctttaacctcttacggtcacatggattcccaatgtcaaatcttatctgcca 559
Query: 360 cacagttaccacacgcgatgttttattgtttttgttgtgattgttttaaatcaagttgga 419
|||||||| ||| | ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 tacagttactacatgtgatgttttattgtttttgttgtgattgttttaaatcaagttgga 619
Query: 420 tttaacacggtggaagatactggaaggaagtccatacctgaacctcactggatcctgata 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 tttaacacggtggaagatactggaaggaagtccatacctgaacctcactggatcctgata 679
Query: 480 gaaccatgagtgactgctggagtcagatccctggtctgctggtgaggggcatgcatgctg 539
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 680 gaaccatgagtgactgctggagtcagatccctggtctgctggtgagaggcatgcatgctg 739
Query: 540 gtcacttaggaagctttaatcatctgtctctcagaagagtaggaacacaggactgaaaa- 598
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 gtcacttaggaagctttaatcatctgtctctcagaagagtaggaacacaggactgaaaag 799
Query: 599 aaaatgcaaggacccccatgtccagactcatgacccataacagttagagtccttatcagc 658
||||||||||||||||||||||||| ||||||| ||| ||||||||||||||||||||||
Sbjct: 800 aaaatgcaaggacccccatgtccagtctcatgaaccacaacagttagagtccttatcagc 859
Query: 659 tgacccagtgattgaag 675
|||||||||||||||||
Sbjct: 860 tgacccagtgattgaag 876
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 675
Length of database: 1076
Length adjustment: 10
Effective length of query: 665
Effective length of database: 1066
Effective search space: 708890
Effective search space used: 708890
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no333_g17.g1 MSMg01no333_g17.g1 CHROMAT_FILE:
MSMg01no333_g17.g1 PHD_FILE: MSMg01no333_g17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:20:36 2005
(344 letters)
>mm_chr18_84002611_84003355
Length = 745
Score = 605 bits (313), Expect = e-177
Identities = 337/345 (97%), Gaps = 3/345 (0%)
Strand = Plus / Minus
Query: 1 taataaatgagaaacagcagtcacaggtgggaaggagcccacacttgatgaacgttctcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 544 taataaatgagaaacagcagtcacaggtgggaaggagcccacacttgatgaacgttctcc 485
Query: 61 agaggttctagactaagcaatctgtggcaactggaagtggggtccaagtgctcctgaggg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 484 agaggttctagactaagcaatctgtggcaactggaagtggggtccaagtgctcctgaggg 425
Query: 121 gcccaatgcctggatagcagcaaatggacttccgtatattggcaggatatgggtttcacc 180
||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 424 ccccgatgcctggatagcagcaaatggactttcgtatattggcaggatatgggtttcacc 365
Query: 181 tcagccgactaagatatcccacaatcctctgcgttaataaaaacctaaaactgtgtgatg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 364 tcagccgactaagatatcccacaatcctctgcgttaataaaaacctaaaactgtgtgatg 305
Query: 241 tggaactt-cactgagctgggg-ttgatcttcacacattgaacacacgcatggtattgat 298
|||| ||| |||||||| |||| ||||||||||||||||||||||| |||||||||||||
Sbjct: 304 tggagctttcactgagc-ggggattgatcttcacacattgaacacatgcatggtattgat 246
Query: 299 accaacatgccgcaccccataagtatgcaagacggcagtgactta 343
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 245 accaacatgccgcaccccataagtatgcaagacggcagtgactta 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 344
Length of database: 745
Length adjustment: 9
Effective length of query: 335
Effective length of database: 736
Effective search space: 246560
Effective search space used: 246560
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
