Query= MSMg01no335_j21.b1 MSMg01no335_j21.b1 CHROMAT_FILE:
MSMg01no335_j21.b1 PHD_FILE: MSMg01no335_j21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:23:26 2005
(635 letters)
>mm_chr18_88746002_88747036
Length = 1035
Score = 1189 bits (615), Expect = 0.0
Identities = 626/631 (99%), Gaps = 3/631 (0%)
Strand = Plus / Plus
Query: 5 gaattctatgataaatttccaaattttcatctagcattagttattattaatactttgcca 64
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 208 gaattctat---aaatttccaaattttcatctagcattagttattattaatactttgcca 264
Query: 65 acctgcttagtagacatttccatttgcttcatcactctcacaaacatgccttaaagaaaa 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 acctgcttagtagacatttccatttgcttcatcactctcacaaacatgccttaaagaaaa 324
Query: 125 actctaacattcttcaatctaggtacccccaccatattgatattaaacctaaaacctagt 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 actctaacattcttcaatctaggtacccccaccatattgatattaaacctaaaacctagt 384
Query: 185 tagtgcctcaagaattataaaataatgttatcagtgcttttatcacttgtgacagaggac 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 tagtgcctcaagaattataaaataatgttatcagtgcttttatcacttgtgacagaggac 444
Query: 245 ttttacctcaattcatgggataaatgcctatcatgataagagaaaaatgcaaactactga 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 ttttacctcaattcatgggataaatgcctatcatgataagagaaaaatgcaaactactga 504
Query: 305 tccacatataggatgctgctcaatttcattaaatcacatgtaaaaagaaagtacatatga 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 tccacatataggatgctgctcaatttcattaaatcacatgtaaaaagaaagtacatatga 564
Query: 365 accttcaaaaactgaatatttgtcatgggaattccttacaagccccaccttcacctatga 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 accttcaaaaactgaatatttgtcatgggaattccttacaagccccaccttcacctatga 624
Query: 425 aagataaatatattctcacgtttttctatctggattcagatcctatctatgaaatatggg 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 aagataaatatattctcacgtttttctatctggattcagatcctatctatgaaatatggg 684
Query: 485 aaacatgagtgtctgtagctagtaggagtgtgaatcaagccaaacttcaagcccgtgctc 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 aaacatgagtgtctgtagctagtaggagtgtgaatcaagccaaacttcaagcccgtgctc 744
Query: 545 caaaaaatgatagatatacttctataaaccatcttacttatacttcattttaagacatac 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 caaaaaatgatagatatacttctataaaccatcttacttatacttcattttaagacatac 804
Query: 605 agtatatgtaaagatctctaaaatatttctg 635
|||| ||||||||||||| ||||||||||||
Sbjct: 805 agtagatgtaaagatctccaaaatatttctg 835
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 635
Length of database: 1035
Length adjustment: 10
Effective length of query: 625
Effective length of database: 1025
Effective search space: 640625
Effective search space used: 640625
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no335_j21.g1 MSMg01no335_j21.g1 CHROMAT_FILE:
MSMg01no335_j21.g1 PHD_FILE: MSMg01no335_j21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:23:26 2005
(503 letters)
>mm_chr18_88915379_88916281
Length = 903
Score = 965 bits (499), Expect = 0.0
Identities = 502/503 (99%)
Strand = Plus / Minus
Query: 1 agtcctaactaaaatacaactaataattctatagaggtataattcccataagggaccctc 60
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 703 agtcctaagtaaaatacaactaataattctatagaggtataattcccataagggaccctc 644
Query: 61 ttgagcagcttatggtcatgattagcattaatgtttctaagttaccaccaatggctacag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 643 ttgagcagcttatggtcatgattagcattaatgtttctaagttaccaccaatggctacag 584
Query: 121 cagctctggtgacaggagtcctgaattctggatgatgtgcaatatcagagttctggaagt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 583 cagctctggtgacaggagtcctgaattctggatgatgtgcaatatcagagttctggaagt 524
Query: 181 aagtttcttgttcatacttagaaatgaaatagtggcttggaagtgttcccagttattaac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 523 aagtttcttgttcatacttagaaatgaaatagtggcttggaagtgttcccagttattaac 464
Query: 241 ctttgaagaaaagattgctcattagcatttcattaaacctctctcactaatgctgccttc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 463 ctttgaagaaaagattgctcattagcatttcattaaacctctctcactaatgctgccttc 404
Query: 301 ttatttactgatcatctgtccttatgcaattcaccacaggcaaaggtttaggacattttg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 403 ttatttactgatcatctgtccttatgcaattcaccacaggcaaaggtttaggacattttg 344
Query: 361 agtctattctttgctccacactagcacagaatcttcatttattgtaaaggcattaagacc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 343 agtctattctttgctccacactagcacagaatcttcatttattgtaaaggcattaagacc 284
Query: 421 tatagatagacataatgttgtctggagtccacagtttttactattgttgggactagtctc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 283 tatagatagacataatgttgtctggagtccacagtttttactattgttgggactagtctc 224
Query: 481 tggctgccagtgaggatacaagt 503
|||||||||||||||||||||||
Sbjct: 223 tggctgccagtgaggatacaagt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 503
Length of database: 903
Length adjustment: 10
Effective length of query: 493
Effective length of database: 893
Effective search space: 440249
Effective search space used: 440249
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
