Query= MSMg01no341_a11.b1 MSMg01no341_a11.b1 CHROMAT_FILE:
MSMg01no341_a11.b1 PHD_FILE: MSMg01no341_a11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:30:10 2005
(463 letters)
>mm_chr18_88863482_88864346
Length = 865
Score = 862 bits (446), Expect = 0.0
Identities = 456/460 (99%), Gaps = 2/460 (0%)
Strand = Plus / Minus
Query: 6 gaattctgttgtctctggaaatagaagagttgcttggttggtttttgtggcttcattttt 65
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 571 gaattctgttgtctctggaaatagaagagttgcttggttggtttttgtggcttcattttt 512
Query: 66 ctcattcctccccctagcctgtatccctcacccctattttccaatcagattctagatgtt 125
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 511 ctcattcctccccctagcctgtatccctcacccctattttccaatcagattctagatgtt 452
Query: 126 gatgtgtttacctgcatcacagtctcagttgaatgcttctagaaacctgggcacatttgt 185
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 451 gatgtgtttacctgcatcacagtctcagttgaatgcttctagaaacctgggcacatttgt 392
Query: 186 atcagccaagctttacagtgtgcttgggggattaattaccaagtacagacacataaaaaa 245
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 391 atcagccaagctttacagtgtgcttgggggattaattaccaagtacagacacataaaaaa 332
Query: 246 tgtggaagaatttaaaatgctttgatgctggctgagtggaagggaagtttgagtcagtct 305
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||
Sbjct: 331 tgtggaagaatttaaaatgctttgatgcgggctgagtggaagggaagtttgagtcagcct 272
Query: 306 acagatattaatttagtgaggttagaaattacactttgtgtgagtc--tgagtgacttca 363
|||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 271 acagatattaatttagtgaggttagaaattacactttgtgtgagtctgtgagtgacttca 212
Query: 364 tgatgatctctctctctctctctctctctctctgtctctctgtctctctctttagggcag 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 211 tgatgatctctctctctctctctctctctctctgtctctctgtctctctctttagggcag 152
Query: 424 catgactatctctttgtgattttgtttataggcataagaa 463
||||||||||||||||||||||||||||||||||||||||
Sbjct: 151 catgactatctctttgtgattttgtttataggcataagaa 112
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 463
Length of database: 865
Length adjustment: 10
Effective length of query: 453
Effective length of database: 855
Effective search space: 387315
Effective search space used: 387315
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no341_a11.g1 MSMg01no341_a11.g1 CHROMAT_FILE:
MSMg01no341_a11.g1 PHD_FILE: MSMg01no341_a11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:30:10 2005
(478 letters)
>mm_chr18_88721465_88722342
Length = 878
Score = 402 bits (208), Expect = e-116
Identities = 223/228 (97%)
Strand = Plus / Plus
Query: 1 acttgctcctttagttgtgacatctgtatatttctatgaacaatgagaggccctatcatt 60
|||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 201 acttgctccttttgttgtgacatctgtatatttctatcaacaatgagaggccctatcatt 260
Query: 61 gggttttcaggtcttagatttcagaaagctatcagcaactacaccctatgtcacacaccc 120
|||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 261 gggttttctggtcttagatttcagagagctatcagcaactacaccctatgtcacacaccc 320
Query: 121 tctgtgatggtttgtatatccttggaccagggagtggcaccatctggaggtatggccttg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tctgtgatggtttgtatatccttggaccagggagtggcaccatctggaggtatggccttg 380
Query: 181 ttggaatagatgtgacctggttggaatgggtgtgtcactgtgggtgtg 228
||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttggaataggtgtgacctggttggaatgggtgtgtcactgtgggtgtg 428
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 478
Length of database: 878
Length adjustment: 10
Effective length of query: 468
Effective length of database: 868
Effective search space: 406224
Effective search space used: 406224
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
