TTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAA
TTCTCTGTTATCATTTACGTTAGTTTTTGCTTATTGAAATATAATGTCCT
TTTCTTTCTGGTTGGATGGCTACAGCTACCACCTGCTTCTTTTTCTCTGT
GCTTCCTCTATACAGAGTTAGGCTTTATTTCAACATCCAACATGCTCGCT
ATCGGTTTGTATACCTCAGGCCTATCATTCCCTGCCACTCCTAATCTTTG
AGTCTTGCTGGCCATTGACTTCTGTGGAACAATGACATCAGTCTCGACCT
CAGTGGTCTGTTCTTCTTTCACCTGATGGCTGGTCTGTGCTTATTGAAAA
GTCATGACCGATGTGTCCTTAGAAACTGAGATTTCCCCACTCTGCCTCAC
TTCCACAAAGCTTTAAAGATGTCTTTGGCCTTCAGCATAGTTCCTCTTAT
GGCCAGAGCTGTACTTCCATTTGTATTCCTGTGCCATGGGAACCAAGAAG
CGCTAAGGACACTTCTCCACCATCACTTAGAATGTCACTACAGGGACCAG
CCGTTCTTCCGTTACCTACCTGAGAATCCTATTGTGAGAATGAACGGTTC
TCCATGAATATTTCACATCGGTGCGAAAATGACTGCCATCCCCGATCCCT
AAAACAGACTCTTAATTCCTACATAAGCTTTTGGCCTTAACGGCTCAACA
ATGGTCTCTCCAATTTCGCCTTTCACCCN

AATGTGCGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXCCAGGGAGTTGCTGGACTTCATCCACATCA
GAAGCCCAAAGGGCTGGGTTCTGATACCAGGGTGGAAATACAGGGACAGC
AGTAGTCATTTAGGAGCTATCTCAGTTATCAGACAGAGTGTGATGCTATC
TCTCTCACATTCTGTTTCACATTCTTTGTTTTTTTGGTTACTTTGTGGGT
TTGGTTTTTGCTTTCTGCCTGTTTGTTTTCTAAAGAGAGTGAGAGAGCAA
GAGAGTGAGAGAGAGCAAGAGAGCAAGTAAGGGAGGGAGGGAGGGAGAGA
GAGAGGTAGAATCCCTTCGCTTCTTTTTTCTTCCCCCCCCTTTTTCTCGA
CTCTATTTTCCTTCCCTTTTCTCTTTTCCTATTTTCCCCCTTTTTTCCTT
CCCCTTCTTTTTTTTTATCCTCTTTTCCTTTATACCCACCTTCTTATTTT
TATTTTCTTTTCTCTCCTTTTCTTTTTTCAATTCTCTCTTCTTCTTTCCT
TTTCCTATTTCCCTTCCTTCCCACCCATTTTTCCTTTCTTTTTCTTTCTT
TTTTTATCCTATCCTCTCTTCCCCCTTTCCGTTCCTCCCTTTTTCTCCCT
ATCCCTACCTATTCCGCCTTTTTCTTATATTTCCCTCCCCCATTCCATTC
TTCCCTTTATTCCTATCCTTTTATCTTCCCCCATTTGTTTTTATCTTTCC
CTTACCTTCTCCCCTCTTTTTTTTTTTTTTTCCCCCCCCTTGCTTCCCCT
CN

Query= MSMg01no341_e18.b1 MSMg01no341_e18.b1 CHROMAT_FILE:
MSMg01no341_e18.b1 PHD_FILE: MSMg01no341_e18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:30:30 2005
         (445 letters)



>mm_chr18_62947952_62948798
          Length = 847

 Score =  750 bits (388), Expect = 0.0
 Identities = 430/444 (96%), Gaps = 4/444 (0%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattctctgttatcatttacgttagtttttgcttattgaaatataatgtccttttcttt 64
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 647 gaattctctgttatcatttacgttagtttttgcttattgaaatataatgtccttttcttt 588

                                                                       
Query: 65  ctggttggatggctacagctaccacctgcttc-tttttctctgtgcttcctctatacaga 123
           |||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||
Sbjct: 587 ctggttggatggctacagctactacctgcttcttttttctctgtgcttcctctatacaga 528

                                                                       
Query: 124 gttaggctttatttcaacatccaacatgctcgctatcggtttgtatacctcaggcctatc 183
           |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 527 gttaggctttatttcaacatccaacatgcttgctatcggtttgtatacctcaggcctatc 468

                                                                       
Query: 184 attccctgccactcctaatctttgagtcttgctggccattgacttctgtggaacaatgac 243
           |||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 467 attccctgccacccctaacctttgagtcttgctggccattgacttctgtggaacaatgac 408

                                                                       
Query: 244 atcagtctcgacctcagtggtctgttcttctttcacctgatggctggtctgtgcttattg 303
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 407 atcagtctcgacctcagtggtctgttcttctttcacctgatggctggtctgtgcttattg 348

                                                                       
Query: 304 aaaagtcatga-ccgatgtgtccttagaaactgagattt-ccccactctgcctcacttcc 361
           ||||||||||| | | ||||||||||||||||||||||| |||| |||||||||||||||
Sbjct: 347 aaaagtcatgatcag-tgtgtccttagaaactgagatttccccccctctgcctcacttcc 289

                                                                       
Query: 362 acaaagctttaaagatgtctttggccttcagcatagttcctcttatggccagagctgtac 421
           |||||||||||||||||||||||||| |||||| |||||||||||||||||||| |||||
Sbjct: 288 acaaagctttaaagatgtctttggccctcagcagagttcctcttatggccagagttgtac 229

                                   
Query: 422 ttccatttgtattcctgtgccatg 445
           ||||||||||| ||||||||||||
Sbjct: 228 ttccatttgtactcctgtgccatg 205


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 445
Length of database: 847
Length adjustment: 10
Effective length of query: 435
Effective length of database: 837
Effective search space:   364095
Effective search space used:   364095
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)