Query= MSMg01no346_a09.b1 MSMg01no346_a09.b1 CHROMAT_FILE:
MSMg01no346_a09.b1 PHD_FILE: MSMg01no346_a09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:36:36 2005
(648 letters)
>mm_chr18_26265638_26266686
Length = 1049
Score = 1216 bits (629), Expect = 0.0
Identities = 641/645 (99%), Gaps = 1/645 (0%)
Strand = Plus / Plus
Query: 5 gaattctttcatttctgtcttctgtcccttcacctataaaattggactaataatagtgtc 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctttcatttctgtcttctgtcccttcacctataaaattggactaataatagtgtc 264
Query: 65 taaatgtagattattgtgagaattaactaagattgtgggtctgaagttaaaggcaatgga 124
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 265 taaatgtagattattgtgagaattaactaagattatgggtctgaagttaaaggcaatgga 324
Query: 125 ggaatctaacttataatgttattttatctattattagaggtttatttcaatgcatgagat 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 ggaatctaacttataatgttattttatctattattagaggtttatttcaatgcatgagat 384
Query: 185 gatgacctataaggggaaggctctatagagtatcttgtgaatgtgttttatgtggtagac 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 gatgacctataaggggaaggctctatagagtatcttgtgaatgtgttttatgtggtagac 444
Query: 245 tttgagaaaatttagggcttagcagatggagacatggggctgccaattatatgaatggca 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 tttgagaaaatttagggcttagcagatggagacatggggctgccaattatatgaatggca 504
Query: 305 gatgacctgaggggctcagtggggggttagaggtgcctgggttctgttaaagaccaacat 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 gatgacctgaggggctcagtggggggttagaggtgcctgggttctgttaaagaccaacat 564
Query: 365 gtagcctggggaacaatgaaagaagataataatttggaaagatagtaagaagtgtactgg 424
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||
Sbjct: 565 gtagcctggggaacaatgagagaagataataatttggaaagatagtaagaagtgtaccgg 624
Query: 425 gccatatatgctagggtagtatgggtacttttggtaaaacaagtgaaatgatgactaaag 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 gccatatatgctagggtagtatgggtacttttggtaaaacaagtgaaatgatgactaaag 684
Query: 485 atatcgttctggtattgctatggaaagaagagtgacagaaagcaaagcccaagaaaaagt 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 atatcgttctggtattgctatggaaagaagagtgacagaaagcaaagcccaagaaaaagt 744
Query: 545 atgagacaataaaaggacaaagggggctccatccctctgaccatcagttgttaacctatc 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 atgagacaataaaaggacaaagggggctccatccctctgaccatcagttgttaacctatc 804
Query: 605 aaggaaaattcacattttttt-gaaagtcagtctcacagagaaaa 648
||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 805 aaggaaaattcacattttttttgaaagtcagtctcacagagaaaa 849
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 648
Length of database: 1049
Length adjustment: 10
Effective length of query: 638
Effective length of database: 1039
Effective search space: 662882
Effective search space used: 662882
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no346_a09.g1 MSMg01no346_a09.g1 CHROMAT_FILE:
MSMg01no346_a09.g1 PHD_FILE: MSMg01no346_a09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:36:36 2005
(606 letters)
>mm_chr18_26468164_26469172
Length = 1009
Score = 1081 bits (559), Expect = 0.0
Identities = 597/613 (97%), Gaps = 11/613 (1%)
Strand = Plus / Minus
Query: 1 catactgatgagtttggaac-aacacacaatggaagaaaatcacaatgggcaaaatgttc 59
|||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||
Sbjct: 809 catactgatgagtttggaacaaacactcaatggaagaaaatcacaatgggcaaaatgttc 750
Query: 60 ccacttgtgggtagctgttgatgttcctgagaccccgattcttacatgttc-gggaaacc 118
|||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||
Sbjct: 749 ccacttgtgggtagctgttgatgttcctgagaccccgattcttacatg-tctgggaaacc 691
Query: 119 tggacagaggcacttgtgatgtaattctagaatatacttttgtcttcctatctgccaagc 178
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 690 tggacagaggcacttgtgatgtaattatagaatatacttttgtcttcctatctgccaagc 631
Query: 179 caagctgcaaattagcaaaagtgggcagtttttagaaagaaaaagttgttaggtctacag 238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 630 caagctgcaaattagcaaaagtgggcagtttttagaaagaaaaagttgttaggtctacag 571
Query: 239 atcaatattttctagaatagaagaaaagaaaaaatccaaactctatcttgcttttcctaa 298
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 570 atcaatattttctagaatagaagaaaagaaaaaatccaaactctatcttgcttttcctaa 511
Query: 299 agaacaagacggtgctcaagattaagaactgaagccccagaggaaagtccgaaacttggt 358
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 510 agaacaagacggtgctcaagattaagaactgaagccccagaggaaagtccgaaacttggt 451
Query: 359 acagtcacctgactactaagaaatatggcaccaagaatgctactctacactctcactacc 418
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 450 acagtcacctgactactaagaaatatgacaccaagaatgctactctacactctcactacc 391
Query: 419 ttgtaatgtttcctaatgtttcccttctttggtctttggc-----aaaaaaaaaaaaagg 473
|||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 390 ttgtaatgtttcctaatgtttcccttctttggtctttggcaaaaaaaaaaaaaaaaaa-- 333
Query: 474 gctagaagatatgtacagagggcttgggggaagggagaataaaaaacccaatgttgttag 533
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 332 gctagaagatatgtacagagggcttgggggaagggagaataaaaaacccaatgttgttag 273
Query: 534 ttatcagaacagtgtctatccccaggcaccaagagctaccacccactgaatgtttatacc 593
|||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 272 ttatca-aacagtctctatccccaggcaccaagagctaccacccactgaatgtttatacc 214
Query: 594 tcaaatagagaca 606
|||| ||||||||
Sbjct: 213 tcaagtagagaca 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 606
Length of database: 1009
Length adjustment: 10
Effective length of query: 596
Effective length of database: 999
Effective search space: 595404
Effective search space used: 595404
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
