Query= MSMg01no352_a10.b1 MSMg01no352_a10.b1 CHROMAT_FILE:
MSMg01no352_a10.b1 PHD_FILE: MSMg01no352_a10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:44:25 2005
(357 letters)
>mm_chr18_13227278_13228035
Length = 758
Score = 654 bits (338), Expect = 0.0
Identities = 350/354 (98%), Gaps = 1/354 (0%)
Strand = Plus / Plus
Query: 5 gaattctctctttactttttattggtaccctatcctcatttgcttttgtcttaattcctt 64
|||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctctccttactttttactggtaccctatcctcatttgcttttgtcttaattcctt 264
Query: 65 aacctaatttattcttttgtgatgtatttgctttttaaaagtttctggaaatcttcagag 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 aacctaatttattcttttgtgatgtatttgctttttaaaagtttctggaaatcttcagag 324
Query: 125 gactgagatgagggtaaaaataggcaaagagggaaaatgaatgatgaagtttctctctgt 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 gactgagatgagggtaaaaataggcaaagagggaaaatgaatgatgaagtttctctctgt 384
Query: 185 ctgacagttctgtgtaatggaagatgacaggttcgggtatgactagggacgcccctgtcc 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 ctgacagttctgtgtaatggaagatgacaggttcgggtatgactagggacgcccctgtcc 444
Query: 245 aaagtatcttgcttct-gtgttcttcattcttatgtttggaacacctgttctgacacagt 303
|||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 445 aaagtatcttgcttcttgtgttcttcatccttatgtttggaacacctgttctgacacagt 504
Query: 304 gcaatacgatggcacagatctgctggatgcgtcatcacaatgaaataatttgcc 357
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 gcaatacgatggcacagatctgctggatgcgtcatcacaatgaaataatttgcc 558
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 357
Length of database: 758
Length adjustment: 9
Effective length of query: 348
Effective length of database: 749
Effective search space: 260652
Effective search space used: 260652
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no352_a10.g1 MSMg01no352_a10.g1 CHROMAT_FILE:
MSMg01no352_a10.g1 PHD_FILE: MSMg01no352_a10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:44:25 2005
(376 letters)
>mm_chr18_13429381_13430156
Length = 776
Score = 712 bits (368), Expect = 0.0
Identities = 374/376 (99%)
Strand = Plus / Minus
Query: 1 tcacctgaggaataccgaattgctgagaagcacctgaaaaaacatgttcagcatccttaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 639 tcacctgaggaataccgaattgctgagaagcacctgaaaaaacatgttcagcatccttaa 580
Query: 61 ttaatgggctaaggtttcctttactgctgataccttcaccactcagtgaggtatgtaggc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 579 ttaatgggctaaggtttcctttactgctgataccttcaccactcagtgaggtatgtaggc 520
Query: 121 tggcaccattgatatcacgctggggaccacattgattttaggtcttcccaaatcacaatg 180
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 519 tggcaccattgatatcacactggggaccacattgattttaggtcttcccaaatcacaatg 460
Query: 181 tatatttgagtgaagtccctagacaatgcttagtcatctgggaactcacaagcttttctg 240
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 459 tatatttgagtgaagtccctagacaatgcttggtcatctgggaactcacaagcttttctg 400
Query: 241 agtagctttgctcatcacttctaacttgaatctgccaccatagcatccttgcccagttca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 399 agtagctttgctcatcacttctaacttgaatctgccaccatagcatccttgcccagttca 340
Query: 301 gaatctctagacatgaagaaattgaccatcaaggactttttatgttgtctgaaaatcacc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 339 gaatctctagacatgaagaaattgaccatcaaggactttttatgttgtctgaaaatcacc 280
Query: 361 cttttagaggagccac 376
||||||||||||||||
Sbjct: 279 cttttagaggagccac 264
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 376
Length of database: 776
Length adjustment: 9
Effective length of query: 367
Effective length of database: 767
Effective search space: 281489
Effective search space used: 281489
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
