TCAATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCG
GAATTCACCAGACTAACAAACACTGTTCCGTATCTGACATATGCAAACCC
CTCCAATTTTCTCACAGGGGTGATTCTAGAACCTTTTAAATAAGTGTTAG
GGTTGAATATTATTGGAACTGGACTCCAATTGACTAATTGATATGAGGCC
ACAAAAACTATAAACAACTTCTAACTATCAGAAGATTTTTATCTGGTATT
GTAGAGACGAATATGATTCAGTTTGATTAAGTTACATTACATTACATTTA
ATTTAATTTAATTTAATTACTTCCTTACTCCTCTAAGCTTTTGACTGAGG
CTTATTCATTAATTCTTTCTTTTTATCCCTGGGTTCCTAGGATATATAGA
TGACAACTTATATGTAAGAAGTCAATCATCTATTTTACCAGGAAATACAT
ATGATTACATATGGATAAATTTCACTCAGGTATTGACTTGCTTTTAATAT
GAGTAATTAACCTTCATCTTGGGGCCATTAAGACTTCTGGTTCAATTCCT
TTTTTTCTTTTTATTTTATGAAGCCTGCTTATAAAATGTAGGGGTGTTAA
TGTCCTGGGAATTCTACTATATAACATTGCTAAACATCCTGCAAGTGAAG
ATAGGTATATATATATATATATCATGATATAAAACACTATGCACTTATTT
CATCAACTAAATANGTGTACATTTGATAACTTTATAATTTAATGAAGATC
CCTACTTTTATGGCCAAN

NCCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXTCACCTGAGGAAACCAAATGGCT
GAGAAGCATCTGAAAAAATGTTCAGCATCCTTAATCATCAGAGAAATGCA
AATCAAAACAACCCTGAGATTCCACCTCACACCAGTCATAATGGCTAAGA
TCAAAAATTCAGGTAATAGCAGATGCTGGCAAGGATGTGGAGAAAGAGGT
ACACTCCTCCATTGTTGGTGGGATTGCAAGCTTGTACAACCACTCTGGAA
ATCAGTCTGGCGGTTCCTCAGAAAATTGGACATAGTACTACAGGAGGATC
CCGCAATACCTCTCCTGGGCATATATCCAGAAGATGTCCCAACCAGTAAG
AAGGACACATGCTCCACTATGTTCATAACAGCCTTATTTATAATAGCCAG
AAGCTGGAAAGAACCCAGATGCCCCTCAACAGAGGAATGGATACNAAAAA
TATGGTACATTTACACAATGGAGTACTACTCCGCTATTAAAATGAATGAA
TTTATGAAATTCCTAGGCAAATGTTTGGACCTGGAGGGGATCTTTCTGAG
TGAGGTAACCAACCCCCAAAGAACTCAATGAAATGGACCCCCTGGTAAGG
GGGATTTAACCCCAAACTTATTATACCCCAAAATTATAAAAAAATTTTTT
GAAACCCTGAACTGGGAAAAAAAAAGACCCAACGGGGGGACCTTGGCCCT
CCTTAAATTGGGAAAACCCCCCCTGGGAGGAGGTCAGAAAAA

Query= MSMg01no354_b22.b1 MSMg01no354_b22.b1 CHROMAT_FILE:
MSMg01no354_b22.b1 PHD_FILE: MSMg01no354_b22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:47:11 2005
         (545 letters)



>mm_chr18_18215707_18216651
          Length = 945

 Score = 1031 bits (533), Expect = 0.0
 Identities = 539/541 (99%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattcaccagactaacaaacactgttccgtatctgacatatgcaaacccctccaatttt 64
           |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcaccagactaataaacactgttccgtatctgacatatgcaaacccctccaatttt 264

                                                                       
Query: 65  ctcacaggggtgattctagaaccttttaaataagtgttagggttgaatattattggaact 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ctcacaggggtgattctagaaccttttaaataagtgttagggttgaatattattggaact 324

                                                                       
Query: 125 ggactccaattgactaattgatatgaggccacaaaaactataaacaacttctaactatca 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 ggactccaattgactaattgatatgaggccacaaaaactataaacaacttctaactatca 384

                                                                       
Query: 185 gaagatttttatctggtattgtagagacgaatatgattcagtttgattaagttacattac 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 gaagatttttatctggtattgtagagacgaatatgattcagtttgattaagttacattac 444

                                                                       
Query: 245 attacatttaatttaatttaatttaattacttccttactcctctaagcttttgactgagg 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 attacatttaatttaatttaatttaattacttccttactcctctaagcttttgactgagg 504

                                                                       
Query: 305 cttattcattaattctttctttttatccctgggttcctaggatatatagatgacaactta 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 505 cttattcattaattctttctttttatccctgggttcctaggatatatagataacaactta 564

                                                                       
Query: 365 tatgtaagaagtcaatcatctattttaccaggaaatacatatgattacatatggataaat 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 tatgtaagaagtcaatcatctattttaccaggaaatacatatgattacatatggataaat 624

                                                                       
Query: 425 ttcactcaggtattgacttgcttttaatatgagtaattaaccttcatcttggggccatta 484
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 ttcactcaggtattgacttgcttttaatatgagtaattaaccttcatcttggggccatta 684

                                                                       
Query: 485 agacttctggttcaattcctttttttctttttattttatgaagcctgcttataaaatgta 544
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 agacttctggttcaattcctttttttctttttattttatgaagcctgcttataaaatgta 744

            
Query: 545 g 545
           |
Sbjct: 745 g 745


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 545
Length of database: 945
Length adjustment: 10
Effective length of query: 535
Effective length of database: 935
Effective search space:   500225
Effective search space used:   500225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)