Query= MSMg01no355_d12.b1 MSMg01no355_d12.b1 CHROMAT_FILE:
MSMg01no355_d12.b1 PHD_FILE: MSMg01no355_d12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:48:36 2005
(524 letters)
>mm_chr18_57004918_57005841
Length = 924
Score = 977 bits (505), Expect = 0.0
Identities = 517/521 (99%)
Strand = Plus / Minus
Query: 4 ggaattccacattacgctgagactatgctgtttgtacagtatgtttgtgaaggagaacga 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 724 ggaattccacattacgctgagactatgctgtttgtacagtatgtttgtgaaggagaacga 665
Query: 64 gggaaacttaaggtccccttggtcgtgaagattctgtctcctttccctatgcccactaca 123
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 664 ggaaaacttaaggtccccttggtcgtgaagattctgtctcctttccctatgcccactaca 605
Query: 124 gagtcttgctggagaaaagtgaaacataggctgttgcaactatttgtctggtaaattctg 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 604 gagtcttgctggagaaaagtgaaacataggctgttgcaactatttgtctggtaaattctg 545
Query: 184 tatgcctcttagaaagtagagaacctagattacagtttgaccaagactcaaaagcctaca 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 544 tatgcctcttagaaagtagagaacctagattacagtttgaccaagactcaaaagcctaca 485
Query: 244 gaagaaatactaaacaatggagaaaaatgtgcaaggaccttgaatgggaacagtaagggg 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 484 gaagaaatactaaacaatggagaaaaatgtgcaaggaccttgaatgggaacagtaagggg 425
Query: 304 cagtgccttacaaatagtgctatcaaacatgtctaatcaccctttggccagttatgtcaa 363
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 424 cagtgccttacaaatagtgctatcagacatgtctaatcaccctttggccagttatgtcaa 365
Query: 364 atatcaccctatatcaacaaggaagagatgagtcctgtgaatgcattaaatgaaaaatga 423
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 364 atatcaccctatatcaacaaggaagagatgagtcctgtgaatgcattaaacgaaaaatga 305
Query: 424 ggggccacatactaatggcggggaagcagatatgtaataacaatgatgaagctgttgagt 483
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 304 ggggccacatactaatggcggggaagcagatatgtaataacgatgatgaagctgttgagt 245
Query: 484 tcatcattctctctgaagaagttgctatagttgaagcatca 524
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 244 tcatcattctctctgaagaagttgctatagttgaagcatca 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 524
Length of database: 924
Length adjustment: 10
Effective length of query: 514
Effective length of database: 914
Effective search space: 469796
Effective search space used: 469796
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no355_d12.g1 MSMg01no355_d12.g1 CHROMAT_FILE:
MSMg01no355_d12.g1 PHD_FILE: MSMg01no355_d12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:48:36 2005
(243 letters)
>mm_chr18_56821914_56822558
Length = 645
Score = 400 bits (207), Expect = e-116
Identities = 235/245 (95%), Gaps = 2/245 (0%)
Strand = Plus / Plus
Query: 1 aaggctggcctggactacacagtgaaaggtaaccatgaccacaccacacacatctgtaac 60
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 201 aaggctggcctggactacacagtgaaaggtagccatgaccacaccacacacatctgtaac 260
Query: 61 cccagggataaagatgagtagggtagagagcaagcaggggcgagaggattgctggggttt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cccagggataaagatgagtagggtagagagcaagcaggggcgagaggattgctggggttt 320
Query: 121 ccttgactttagctgacacatgaaaatctctgcctcaagagattagtggagagaggtaat 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 321 ccttgactttagctgacacatgaaaatctctgcctcaagagattagtggagagaggggat 380
Query: 181 --gatagctttttctgcctgtatgctaaaacacaaccccacacacgcacatcattgtatt 238
|||||| ||||||||| ||||||| |||||||||||||||||| ||||||| ||||||
Sbjct: 381 ctgatagccttttctgccggtatgcttaaacacaaccccacacacacacatcactgtatt 440
Query: 239 tgtat 243
|||||
Sbjct: 441 tgtat 445
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 243
Length of database: 645
Length adjustment: 9
Effective length of query: 234
Effective length of database: 636
Effective search space: 148824
Effective search space used: 148824
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
