Query= MSMg01no355_e07.b1 MSMg01no355_e07.b1 CHROMAT_FILE:
MSMg01no355_e07.b1 PHD_FILE: MSMg01no355_e07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:48:40 2005
(559 letters)
>mm_chr18_62334552_62335510
Length = 959
Score = 1029 bits (532), Expect = 0.0
Identities = 551/558 (98%), Gaps = 3/558 (0%)
Strand = Plus / Minus
Query: 4 ggaattccaaa--taatctcgttaaaatttcagctatgaaggttaacgtcaattctcagc 61
|||||||| || ||| || ||||||||||||||||||||||||||||||||||||||||
Sbjct: 778 ggaattcctaatgtaa-cttgttaaaatttcagctatgaaggttaacgtcaattctcagc 720
Query: 62 taaaagaggcttttgcagcgtttgagtccctttaggaatgctttaagcttaagaactttg 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 719 taaaagaggcttttgcagcgtttgagtccctttaggaatgctttaagcttaagaactttg 660
Query: 122 atccatttttaggggcttggaaaacaagaacaccaggaccctcctgtgatcccttgtttt 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 659 atccatttttaggggcttggaaaacaagaacaccaggaccctcctgtgatcccttgtttt 600
Query: 182 ttcacctctcatgtgggtttgtgttccctccgtcccttcgagtctcctgtttgttgacac 241
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 599 ttcacctctcatgtgggtttgtgttccctccgtccctccgagtctcctgtttgttgacac 540
Query: 242 gctagttacataaggtttgtgttggattcgtcaccctaaagttttctttgcctggacagc 301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 539 gctagttacataaggtttgtgttggattcgtcaccctaaagttttctttgcctggacagc 480
Query: 302 aagttctcagagtctgtcaaatgagaaccttatcctgagatgcaagctgacaggtgtgaa 361
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 479 aagttctcagagtctgtcaaatgagaactttatcctgagatgcaagctgacaggtgtgaa 420
Query: 362 tggtggcgggacagggtgggcctgcctgggagataattactgaggcaaagaatctaggag 421
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 419 tggtggcgggacagggtgggcctgcctgggagataattactgaggcaaagaatctaggag 360
Query: 422 gggaaaggagcctggaaataggagctgcccttacatgctgctgagaatgtttgtgatgga 481
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 359 gggaaaggagcctggaaataggagctgcccttacatgctgctgagaatgtttgtgatgga 300
Query: 482 ggacttgctgccaaatcctgtacaccagaaagagtcctctcctcgggtcactgtagcaca 541
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 299 ggacttgctgccaaatcctgtacaccagaaagagtcctctcctcgggtcactgtagcaca 240
Query: 542 cctgctgggtgcatgtga 559
||||||||||||||||||
Sbjct: 239 cctgctgggtgcatgtga 222
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 559
Length of database: 959
Length adjustment: 10
Effective length of query: 549
Effective length of database: 949
Effective search space: 521001
Effective search space used: 521001
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no355_e07.g1 MSMg01no355_e07.g1 CHROMAT_FILE:
MSMg01no355_e07.g1 PHD_FILE: MSMg01no355_e07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:48:40 2005
(508 letters)
>mm_chr18_62147721_62148628
Length = 908
Score = 806 bits (417), Expect = 0.0
Identities = 474/493 (96%)
Strand = Plus / Plus
Query: 1 atgaatgaataaatgcatgaacaaatgaatgataataatttccttatgatgggaaaggcc 60
|||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 atgaatgaatgaatgcatgaacaaatgaatgataataatttccttatgatgggaaaggct 260
Query: 61 catggctttgtagaggaaggacagcaactttactgtcactaatgttgctgatgaagggtt 120
|||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 261 gatggctttgtagaggaaggacagcaactttactgtcgctaatgttgctgatgaagggtt 320
Query: 121 aattttctctcacgtctttggtgatgatatgtcttagtcagggtttcaattcctgcacaa 180
| |||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||
Sbjct: 321 acttttctctcacgtcttcggtgatggtatgtcttagtcagggtttcaattcctgcacaa 380
Query: 181 acatcatgaccaagaagcaagttggggaggaaagggtttattcagcttacacttccatac 240
||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||
Sbjct: 381 acatcatgaccaagaagcacgttggggaggaaagggtttatttggcttacacttccatac 440
Query: 241 tgttgttcatcaccaaagaaagtcaggactggaactcaagcagctcaggaagcaggagct 300
|| ||||||||||||||| |||||||||||||||||||||||| |||| |||||||||||
Sbjct: 441 tgctgttcatcaccaaaggaagtcaggactggaactcaagcaggtcagaaagcaggagct 500
Query: 301 gatgcagaagccatggagagatgttacttactggcttgctcagcctgctctcttatagaa 360
|||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||
Sbjct: 501 gatgcagaagccatggagggatgttgcttactggcttgctcagcctgctctcttatagaa 560
Query: 361 cccaagactgccagcccagagatggcaccacccacaaggggcctttcccccttgatcact 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 cccaagactgccagcccagagatggcaccacccacaaggggcctttcccccttgatcact 620
Query: 421 aattgagaaaatgccccacagctggatctcatggaggcatttcctcaaatgaagctcttt 480
||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 621 aattgagaaaatgccttacagctggatctcatggaggcatttccccaaatgaagctcttt 680
Query: 481 ctctgtgataacc 493
|||||||||||||
Sbjct: 681 ctctgtgataacc 693
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 508
Length of database: 908
Length adjustment: 10
Effective length of query: 498
Effective length of database: 898
Effective search space: 447204
Effective search space used: 447204
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
