CXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCCAC
CCATCCCCCAAGTTATAGTATTTTTCTACTTCATCCCATATTGTTTCCTA
TTTGGTACCTGACTATCGACCATAGACTGTTCATTAAAAAAATAGAAGCA
GCTTTCAGAACCCCACAGGAGACTTTTCATATGCTAAAGAGCTATGATGA
AGTAAAGGCAAGAAAAATGCTTGCCTTGTGACTCTGAAATAGAGTACAGA
AGTAGTTCACAATCATTTCCCCTTTCAACATTAAATGCCACTGATCTTTG
TAAGGCCAGGATATGCACTGACACATAAATACAAGAACACAATTTAATTT
TCTCATTGGCTGCGTGTCAAGGAGCTTAGAGTTACTTATCCTTAGACATC
AGATGAGATACTAGGATATAAGTCAAAGGCGAGGGGAGACAAGACATCTG
AGGTGTGTCCCTGGGTGGCTGGAGGACCCCGCAGGATTGGTTAACATAAA
GCGACTTGCCAGCGTCTGATACATTTCAAACCAGAAAGGAAAAGGATCGG
ATTCTAAAGTAGAATTAACTCTACTGAGAGATCGCATCTATTTGGAACCA
GATGAAATCATCCTCTCTTCACAATGTGTTCAGAGGAATCTTTAAAGCAG
ACCTTTTAGGACAGCTTTCTGATGCTATCCACTTACACCTAAACAGAACT
TGGTAACATCCGAAAGTTTGCCCG

TGTGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXACTTGTTCTCTGGAGGAGGTAGGGTGTGTGTGTG
TGTGTGTGTGTGTGTCCGCCCCCCCCCCNNCNNCTCCCTTCCCCCCCCNT
CCCCCTCCCTTCTCGGTGCTCTTCTTCTTTTTCCTCTTCCCCTTTTTTTC
CTCCTCCCTCTTCCCCCCCCCTCCCCTCCTCTCTCTCCCCCTTCTTTCCC
CTCTCTTCTTCTCCTCNTGCTCCCCCCTTCTCTACCTCCCTCCCCCCCCC
CCATCCTCCCTTTATTTTTTTCCCCCTTCATCCACTCCTCCCTCCTCCAT
TTTTTCTATTTCTACCATTCCCCTTTTCCTTCATTTCTTTCATTTTATCA
TATTTTTTCCTTCTTCCCTTTTTTACCCCATCCCACATTTCTTCCTTACA
ATTCCTCCTCACTATCTTACCCTACATATTTACCATCTCCCCACCTCTTC
CCCTCCCTTTCTCCATCTCTGCCACCTCCTCCATTCAAACTTTACCTCTA
CCACACTCCTTTCACACTTTTTTCCTTTCTATATCCCATTTTACTCACCC
CACCACATCTCTCTCCTTTATTATACTTTTCCCCCTATCAAACCCTACTA
TCCCCAATTCCTCCTTCCCATATATTCCCCCACCCTTACTCCCTCAATTT
TTCTTTTTCTTTCCATTCCCTCACGTCTTCCATATAACCCCATCTTCCAC
TCCTTCCCACAAATTACCCACCCCCCTCTCTACTCACCCCCTCCTCCCCC
TACCCACTATTCCCACACACTTCCCCCCCTTACTN

Query= MSMg01no358_h15.b1 MSMg01no358_h15.b1 CHROMAT_FILE:
MSMg01no358_h15.b1 PHD_FILE: MSMg01no358_h15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:52:45 2005
         (560 letters)



>mm_chr18_21412773_21413732
          Length = 960

 Score = 1054 bits (545), Expect = 0.0
 Identities = 554/557 (99%)
 Strand = Plus / Plus

                                                                       
Query: 4   ggaattccacccatcccccaagttatagtatttttctacttcatcccatattgtttccta 63
           |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattcctcccatcccccaagttatagtatttttctacttcatcccatattgtttccta 263

                                                                       
Query: 64  tttggtacctgactatcgaccatagactgttcattaaaaaaatagaagcagctttcagaa 123
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 264 tttggtacctgactatcgaccatagactgttcattaaaaaaatagaagcagcttttagaa 323

                                                                       
Query: 124 ccccacaggagacttttcatatgctaaagagctatgatgaagtaaaggcaagaaaaatgc 183
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 ccccacaggagacttttcatatgctaaagagctatgatgaagtaaaggcaagaaaaatgc 383

                                                                       
Query: 184 ttgccttgtgactctgaaatagagtacagaagtagttcacaatcatttcccctttcaaca 243
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 ttgccttgtgactctgaaatagagtacagaagtagttcacaatcatttcccctttcaaca 443

                                                                       
Query: 244 ttaaatgccactgatctttgtaaggccaggatatgcactgacacataaatacaagaacac 303
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 ttaaatgccactgatctttgtaaggccaggatatgcactgacacataaatacaagaacac 503

                                                                       
Query: 304 aatttaattttctcattggctgcgtgtcaaggagcttagagttacttatccttagacatc 363
           ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 504 aatttaattttctcattggctgcgtgtcaaggaacttagagttacttatccttagacatc 563

                                                                       
Query: 364 agatgagatactaggatataagtcaaaggcgaggggagacaagacatctgaggtgtgtcc 423
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 agatgagatactaggatataagtcaaaggcgaggggagacaagacatctgaggtgtgtcc 623

                                                                       
Query: 424 ctgggtggctggaggaccccgcaggattggttaacataaagcgacttgccagcgtctgat 483
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 ctgggtggctggaggaccccgcaggattggttaacataaagcgacttgccagcgtctgat 683

                                                                       
Query: 484 acatttcaaaccagaaaggaaaaggatcggattctaaagtagaattaactctactgagag 543
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 acatttcaaaccagaaaggaaaaggatcggattctaaagtagaattaactctactgagag 743

                            
Query: 544 atcgcatctatttggaa 560
           |||||||||||||||||
Sbjct: 744 atcgcatctatttggaa 760


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 560
Length of database: 960
Length adjustment: 10
Effective length of query: 550
Effective length of database: 950
Effective search space:   522500
Effective search space used:   522500
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)