XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTC
AGAGAGTTTCCCGAGGCAGAGACCATGGAAATTTCGAAGGAGGACAAAGA
CAATAAGAAGGTGAGAGGTGATTGAGAGTTAAAACTAATGAAGGCAAGAG
GCTCCCCAAAATTCCTAGAGTGGTAATTACTGAAAGAGTTCCAGATTGCT
GCTGAGAGATAAGAACCTAGGACCCCAACCTCCAGTGAGGAGGCAGGGAG
TCTTCTGAGTAGCATATGCTTTCAATTTGACACAGTTCAAGGCTATCTGA
GTCTCAACTGAAGGATTGCCTCTTATCAGGTTGCCAGCTGGCAAGTATGA
GGGGCATTTTCTTGGTTGCTAATCCATACAGATAAGAGGATCAGCCCACT
GTGGGCAGAGCCATCCCCAAGCAAGGGATCTCAGGCTGTATGAATGCTAG
CTAAACATAAGCTAGGTCATGTAAGCCATTCAATAGAATAGCCTTCATGA
TTTTTGCTTCAAGTACCTGCCTTGGCTTTCCTCCAGGAGACACTACAACC
TGTAAGATGAAATAAACCTTTTAGTCTCCAAGGAGCTTTCGATCATGGTG
GTGATTACTGTAGCAGTTAAGTAGCTAGGACAGAAAGGTATCCAGCTTAT
GAAGCAAGGTCAGTATGGACCTGCAATCCAGCAGATAATCGGCACTGTAA
GCTTTCAATGCTTTCAGAAAGTGGGAAACCCCAATAGGAG

NNNNTTTCTCGATGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCCTTCTGTCTTAGTCA
GAGTTTCTATTCCTGCACAAACATCATGACCAAGAAGCAAGTTGGGGAGG
AAAGAGTTTATTCAGCTTACACTTCTACATTGCTGCTCATCACCAAAGGA
AGTCAGGACTGGAATTCAGGCAGGTCAGGAAGCAGGAGCTGATGCAGAGG
CCATGGAGGGATGTTACTTACAGGCTTGCTTCCTCTGCCTTGCTCAGCTT
GCTTTCTTATAGAATCCAGAATTACCTGNTCAGGGATGGCACCACCCACA
AGGGGCCCTCCACCCTTGATCACTAATTGAGAAAATGCCCCACAGCTGGA
TCTCATGGAGGCATTTCCTCAAGGGAAGCTCCTTTCTCTGTGGTAACTCC
AGCTTGTGTCAAGTTGACACACAAAACCAGCCAGTACACCTGCTGAGTGC
TGGCATCTGAGTTAGCCTGCCCATCTGACTACACGGCACCCAGCCACTCT
TCTGTGTGAAGCCCTTCTGAGGGAAATGAACCCCAGAACTGTGTCCTTCA
GCCATCATCTTTTGCCAAGAATGTCCAGATGTCCCCGAGTTATCCTGGAT
AGCTTTTTTATTCACCTATTTACAGTTTGATTGGTTGGGCAGGGGCTAGG
CTCCTCCCCCTTGGAAAAGGGGTTCCTTCCCCTTGGCTTGAAGAAACC

Query= MSMg01no363_j11.b1 MSMg01no363_j11.b1 CHROMAT_FILE:
MSMg01no363_j11.b1 PHD_FILE: MSMg01no363_j11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:59:21 2005
         (571 letters)



>mm_chr18_83773279_83774249
          Length = 971

 Score =  659 bits (341), Expect = 0.0
 Identities = 410/433 (94%), Gaps = 4/433 (0%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattcagagagtttcccgaggcagagaccatggaaatttcgaaggaggacaaagacaat 64
           |||||||||||||  |  ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 431 gaattcagagagtagctagaggcagagaccatggaaatttcgaaggaggacaaagacaat 372

                                                                       
Query: 65  aagaaggtgagaggtgattgagagttaaaactaatgaaggcaagaggctccccaaaattc 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 371 aagaaggtgagaggtgattgagagttaaaactaatgaaggcaagaggctccccaaaattc 312

                                                                       
Query: 125 ctagagtggtaattactgaaagagttccagattgctgctgagagataagaacctaggacc 184
           ||||||||||||| |||||||||| ||||||  |||||||||||||||||||||||||||
Sbjct: 311 ctagagtggtaatcactgaaagagctccagagagctgctgagagataagaacctaggacc 252

                                                                       
Query: 185 ccaacctccagtgaggaggcagggagtcttctgagtagcatatgctttcaatttgacaca 244
           |||||||||||||||||||| |||||||| |  |||||||| ||||||||||||||||||
Sbjct: 251 ccaacctccagtgaggaggcggggagtctcccaagtagcatttgctttcaatttgacaca 192

                                                                       
Query: 245 gttcaaggctatctgagtctcaactgaaggattgcctcttatcaggtt-gccagctggca 303
           ||||||||||||||||||||||||||||||||||||||  ||||| || |||||||||||
Sbjct: 191 gttcaaggctatctgagtctcaactgaaggattgcctc-aatcagattggccagctggca 133

                                                                       
Query: 304 agtatgaggggc-attttcttggttgctaatccatacagataagaggatcagcccactgt 362
           ||| |||||||| ||||| |||||||||| || |||||||||||||||||||||||||||
Sbjct: 132 agtctgaggggcaatttt-ttggttgctagtcgatacagataagaggatcagcccactgt 74

                                                                       
Query: 363 gggcagagccatccccaagcaagggatctcaggctgtatgaatgctagctaaacataagc 422
           |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 73  gggcagagccatccccaagcaagggatctcaggctgtatgaatgctagctaagcataagc 14

                        
Query: 423 taggtcatgtaag 435
           |||||||||||||
Sbjct: 13  taggtcatgtaag 1


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 571
Length of database: 971
Length adjustment: 10
Effective length of query: 561
Effective length of database: 961
Effective search space:   539121
Effective search space used:   539121
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)