XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCTTCTA
ACATATGCAAAATGCACATTCTTCTCATCAGGAACTTTCTCTAAAATTAC
CGCATGCCATCGACATGGCTTGGGCATCGCTGTGGTGGGTAAACCGAGGC
AGCCAGCCCTTGGGGGTCAGTGCTTAGCACTGCTGAATCGGGTGGGTGGA
TCCAGATGCCTATAGGGGCTGCTGTCAAAGGCAGCCAGCGGTTACTTAGA
GAAGAGGCTCAGCAGACTTTTTTTCTGAGGGAACAAAGCTCAATTTACTG
GGGNGGGGGGGGCTGGTTTTTCCTGANGCCAGCAAANNATTGTGAACTCT
TTTAACTCCTTGGAGCCCGTGAGAAAATGAAGGAAAGAAAGAGAATTCAT
GCACACACACAACGGACAAAACATAAGGTGGAGTCCAGTAGCTTCATACA
CACAAATATACATGCACACATACAGACACGTACGCACACATACCTGCATA
CAGACCTACCGACAATACCTGGCCCCTTTACCCTCATAATGTGTATAGCA
AAGATCCTGCACGCTCGTTTCCATATACATCCCCCCTACTCCCTTATTCC
CTCACCCGCTGTTTCACTTCTTGTACCATGTTTCCTCCCTCACTAGTCCT
CTTCTCTACCCAGATCCCTTTTTCTCTATTTACCAGCCGAATTCCTACTC
TTCTTCCCTTATTCCTCTCCTTTTCTTTCTCTTTTCATTTTCTTTATACC
CTTTTATCCCTCTCGCGCTTCTTTACTCTCATC

NCCGATGCTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXATCATGAGTCTGACAGATCTTCTCA
ACATATTTTTTTCTTCTCCTGCCAGTAGTAAAGAGAGTTGCTTCTTTAAA
GAGCGATACTCTCTGCTCCCCTCTTCATCCACAGAGAAGGAAAGCGGGGA
GAAGCAGAGTGTTAGTTTTTCCTAGGCCTTGACGGGAGTAATGTATTGAA
GATTTATAAGCTCACTCTGGCCACATTGAATCAAGCTTCAAACCCAAGTA
CCTGATCCACCGCTTCTTTTTTTGGTGGTGCTCAGTAAATGGTTGTTGAA
TGAATATTTGGGAACGAACTGCCCCTACAGTATTGTTTCTGCAACTCTAA
CTGGCCTCATGCCTCTTGACTCTCAGAAAACACTGAAGGACAGGCTTTCC
GGTAGGGGCCAGTTTTCAGATTTAACTTTGATTTAGCTCAGCTTTCTGTC
TCTTTCATGTGGTGATTTTTCTACTGTGCATCTCAATTAACCACAGGTCT
TCTTTGATGTGAGGATCGGAGACAAAGATGTGGGTAGAATTGTGATTGGC
CTCTTTGGAAACGTTGTACCCAAGACGGGGGAAAACTTCGTGGCTCTGTT
TTTAGGAGAGGTCTTGTCCAGCCTTACTGCCTTTTTCCGATAACTGGTAT
GAATCTTCCTTTAATACCATAAACATAGATGGCCCCCTGGAGATAGGATA
ATCTTN

Query= MSMg01no363_n14.g1 MSMg01no363_n14.g1 CHROMAT_FILE:
MSMg01no363_n14.g1 PHD_FILE: MSMg01no363_n14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:59:42 2005
         (525 letters)



>mm_chr18_53570740_53571664
          Length = 925

 Score =  785 bits (406), Expect = 0.0
 Identities = 435/450 (96%), Gaps = 10/450 (2%)
 Strand = Plus / Minus

                                                                       
Query: 81  atactctctgctcccctcttcatccacagagaaggaaagcggggagaagcagagtgttag 140
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 925 atactctctgctcccctcttcatccacagagaaggaaagcggggagaagcagagtggtag 866

                                                                       
Query: 141 tttttcctaggccttgacgggagtaatgtattgaagatttataagctcactctggccaca 200
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 865 cttttcctaggccttgacgggagtaatgtattgaagatttataagctcactctggccaca 806

                                                                       
Query: 201 ttgaatcaagcttcaaacccaagtacctgatccaccgcttc-----tttttttggtggtg 255
           ||||||||||||||||||||||||||||| |||||||||||          | |||||||
Sbjct: 805 ttgaatcaagcttcaaacccaagtacctggtccaccgcttcaccca-----taggtggtg 751

                                                                       
Query: 256 ctcagtaaatggttgttgaatgaatatttgggaacgaactgcccctacagtattgtttct 315
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 750 ctcagtaaatggttgttgaatgaatatttgggaacgaactgcccctacagtattgtttct 691

                                                                       
Query: 316 gcaactctaactggcctcatgcctcttgactctcagaaaacactgaaggacaggctttcc 375
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 690 gcaactctaactggcctcatgcctcttgactctcagaaaacactgaaggacaggctttcc 631

                                                                       
Query: 376 ggtaggggccagttttcagatttaactttgatttagctcagctttctgtctctttcatgt 435
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 630 ggtaggggccagttttcagatttaactttgatttagctcagctttctgtctctttcatgt 571

                                                                       
Query: 436 ggtgatttttctactgtgcatctcaattaaccacaggtcttctttgatgtgaggatcgga 495
           ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 570 ggtgatttttctactgtgcatctcaattacccacaggtcttctttgatgtgaggatcgga 511

                                         
Query: 496 gacaaagatgtgggtagaattgtgattggc 525
           ||||||||||||||||||||||||||||||
Sbjct: 510 gacaaagatgtgggtagaattgtgattggc 481


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 525
Length of database: 925
Length adjustment: 10
Effective length of query: 515
Effective length of database: 915
Effective search space:   471225
Effective search space used:   471225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)