XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCC
TAGGGTGTCAACACGGTATTAGGACTCTACAACACTATGACACAAAGAAA
AGAATTAAGCTGTTGTAAAGATACAGGACCTGGAAACCACCACAGGGAAA
AAAAATAGACCAGAACTGGGGGGCTCTTTTTTTCCTTCCATTATCATGAA
AGTCTCTGGGTTCTATTTTGCTGGAGGGAATTCTGACGTGGCTATGTAGA
GAGGTTAGCCCAGCATCTCACATGCGAGCAAATGTGATCACAGGCCAGGC
AACCGATGCAGGTGTCTGGAGACAGAACAAGTATAAAAACGGAATTGAAA
TGCATTTAATGATGTAAACGTCTTCACAATGTAAAGATATCTGCTTGCTT
GCCTGGGGCTTGCCCCATCCAGCCCCTTGCCCAGTTCCTGCAGCTCGTGC
TCACCCGTTTGTTCTTTTCAGCAGAAGCTCTGGCTATGTAAGCAAGCAGC
CTTGCCTCTGAGGTGGGAGAGAGCACAGTGAGGATGGAGGAAAGCCCACA
GCTCTTCTACCCCAGGGCTGCAGATTCGGGGAGGGCTAAAAGCCAGTATA
TTCTCCTAAGAGACCCTGGATAACGAAAGGCCCTGGAGGTCTAACCCTCC
ACTTCCCTCTTCCCCGTCCCCCCGTTACCCCGACCTCGTGTTACTTCGTA
TTGACCTTGCGTATCCTTGCCAAGTCACCCGTTTCACCGTTTCCCTTTGC
TAATTCCTAATTACCAGTTT

NNNNTTACGCCTTATTTCCTTATATTCTTATCTTTTTTCTCTCTTGAATG
CTATTGGTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXTTTCTCACTGAGCCTGACTTAAGTCCGCATAGA
TGGCTGTCTCTTGCCTCCAGCTTGAGTCTCAGGATTGCTCTCTTGGGGAT
GTGCTGATGAGTGTTAATTTTGCTTTTGCCTTGTGCCTTCTTGCCCTTCC
TATCTTTTTCTTTTTTTCTTTCTTTTTCTCTCATTTTTCTTTAGTTTTTC
TTTCGCTTCTGCTTGCGTGTGTTTTTCCTTTGATTTCCCTTTTTCCCTCG
TTTCCCTCATATTTCATTACCTTTTTTTTTTTTTTTAGCCTCCACATATC
ACTCGTCTTTCATGTAGTTCGTCATTTTTATCTCTTATCTTTATCTTCTT
GCTCCTTCTTTTCTGTCTTTTTTCCTTTTTTTCTTTTATCTCTCTTGCTT
TCTCTCCATATTCTTTCTTTTATCCTTATATCTTCTCTTTATTCCTTCTT
TTTTTTCGCTACCTTTTTCGCTCCTTTTTTCCCCTCTTATTTCCTCCCCT
CTATTTATTTATTCTTTCCTTTTTTTATTTCTCCCCCCCTTATATACTCT
CCCCTTTCCACTTTTTTACTTTTCTTTTTCCTCTTTTTTTTACACTTTTC
TTTTATTTTATTTTCTTATTCATCCCCTTTATTTCCTCATTTTTCTCTCT
ATTCCCCATCTCACTTTCGTATTCTCCCTTTTATTTATAGTTATACTCTA
TTATATCTTGACTCACTATTTTTTCTTTTTTTTTTCTCTTATTTTCCCCT
TCGCCCTCACCCTATTTGTTTACCCCCCCTTGCCCCTTGATGTTCCCGCC
CTCCCTTCCGTGCATTTTCACCTACCCGTTATCACACCCTACTTAATCAT
TCTC

Query= MSMg01no365_o24.b1 MSMg01no365_o24.b1 CHROMAT_FILE:
MSMg01no365_o24.b1 PHD_FILE: MSMg01no365_o24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:02:35 2005
         (508 letters)



>mm_chr18_83797766_83798672
          Length = 907

 Score =  920 bits (476), Expect = 0.0
 Identities = 497/504 (98%), Gaps = 1/504 (0%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattcctagggtgtcaacacggtattaggactctacaacactatgacacaaagaaaaga 64
           |||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 205 gaattcctagggtgccaacacggtattaggactccacaacactatgacacaaagaaaaga 264

                                                                       
Query: 65  attaagctgttgtaaagatacaggacctggaaaccaccacagggaaaaaaaatagaccag 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 attaagctgttgtaaagatacaggacctggaaaccaccacagggaaaaaaaatagaccag 324

                                                                       
Query: 125 aactggggggctctttttttccttccattatcatgaaagtctctgggttctattttgctg 184
           ||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 aactgaggg-ctctttttttccttccattatcatgaaagtctctgggttctattttgctg 383

                                                                       
Query: 185 gagggaattctgacgtggctatgtagagaggttagcccagcatctcacatgcgagcaaat 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 gagggaattctgacgtggctatgtagagaggttagcccagcatctcacatgcgagcaaat 443

                                                                       
Query: 245 gtgatcacaggccaggcaaccgatgcaggtgtctggagacagaacaagtataaaaacgga 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 gtgatcacaggccaggcaaccgatgcaggtgtctggagacagaacaagtataaaaacgga 503

                                                                       
Query: 305 attgaaatgcatttaatgatgtaaacgtcttcacaatgtaaagatatctgcttgcttgcc 364
           ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 504 attgaaatgcatttaatgatgtaaacgtctttacaatgtaaagatatctgcttgcttgcc 563

                                                                       
Query: 365 tggggcttgccccatccagccccttgcccagttcctgcagctcgtgctcacccgtttgtt 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 tggggcttgccccatccagccccttgcccagttcctgcagctcgtgctcacccgtttgtt 623

                                                                       
Query: 425 cttttcagcagaagctctggctatgtaagcaagcagccttgcctctgaggtgggagagag 484
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 cttttcagcagaagctctggctatgtaagcaagcagccttgcctctgaggtgggagagag 683

                                   
Query: 485 cacagtgaggatggaggaaagccc 508
           ||||||||||| ||||||| ||||
Sbjct: 684 cacagtgaggaaggaggaaggccc 707


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 508
Length of database: 907
Length adjustment: 10
Effective length of query: 498
Effective length of database: 897
Effective search space:   446706
Effective search space used:   446706
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)