Query= MSMg01no367_d17.b1 MSMg01no367_d17.b1 CHROMAT_FILE:
MSMg01no367_d17.b1 PHD_FILE: MSMg01no367_d17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:04:19 2005
(445 letters)
>mm_chr18_80801467_80802311
Length = 845
Score = 764 bits (395), Expect = 0.0
Identities = 428/439 (97%)
Strand = Plus / Minus
Query: 7 gaattctgggtctacccagcaacagacttgtgtgtgtgcagaacaactctgaagctgcct 66
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 645 gaattctgggtctaagcagcaacagacttgtgtgtgtgcagaacaactctgaagctgcct 586
Query: 67 gtccccctgctgttctggggactggcccagctggcctttgaggatagtggttttgtgcaa 126
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 585 gtccccctgctgttctggggactggcccagctggcctttgaggatagtggttttgtgcaa 526
Query: 127 ggtagccggcgccgggcgctgccctgatcagcatatgttgtgtacattcccacttccccc 186
||||||| | || ||| |||||||||||| || |||||||| ||||||||||||||||||
Sbjct: 525 ggtagccagtgctgggtgctgccctgatcggcgtatgttgtatacattcccacttccccc 466
Query: 187 aatcccaacagtaaatgtttatatctctccaaatgcacacagatttacaaaataatgggt 246
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 465 aatccaaacagtaaatgtttatatctctccaaatgcacacagatttacaaaataatgggt 406
Query: 247 gaactctgcccaggaatctgggtttctataaataacattattgggtttttgaacctttta 306
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 405 gaactctgcccaggaatctgggtttctataaataacattattgggtttttgaaccttttt 346
Query: 307 cgttgattttagtcactgaggaaatgttgtggaatccctagattcccttgaagcaagcag 366
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 345 cgttgattttagtcactgaggaaatgttgtggaatccctagattcccttgaagcaagcag 286
Query: 367 gttgagcaggtcagcaggaacactaccagggcagttgtgtgcatccctcttatctcccag 426
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 285 gttgagcaggtcagcaggaacactaccagggcagttgtgtgcatccctcttatctcccag 226
Query: 427 agcaaaactgctattctca 445
|||||||||||||||||||
Sbjct: 225 agcaaaactgctattctca 207
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 445
Length of database: 845
Length adjustment: 10
Effective length of query: 435
Effective length of database: 835
Effective search space: 363225
Effective search space used: 363225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no367_d17.g1 MSMg01no367_d17.g1 CHROMAT_FILE:
MSMg01no367_d17.g1 PHD_FILE: MSMg01no367_d17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:04:19 2005
(421 letters)
>mm_chr18_80617674_80618496
Length = 823
Score = 760 bits (393), Expect = 0.0
Identities = 415/423 (98%), Gaps = 2/423 (0%)
Strand = Plus / Plus
Query: 1 ttgctactgatatatatttgagggcaggcagaatgaagtgaggtgtcatggtcagagaat 60
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 201 ttgctactgatatatatttgagggcaggcagaatgaagtgaggtgtcatggttagagaat 260
Query: 61 ttagggggagggtacagcaaatagaagccagatgacaagcaggcatttggggaacctcac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttagggggagggtacagcaaatagaagccagatgacaagcaggcatttggggaacctcac 320
Query: 121 ttgggttacactagagtgaaccaccttgtaactcagtaccagagaagaggggctggtgct 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 321 ttgggttacactagagtgaaccaccttgtaactcagtaccagagaagaggggctggtgtt 380
Query: 181 cctctggtgtgcgtatgggagctgatgctatgtagagaaggaatagagtcagcacctggc 240
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 381 cctctggtgtgcgtatgggagctgatgctatgtagagagggaatagagtcagcacctggc 440
Query: 241 tttggcattctggccccagctctcagctcttcgcctgcactgtagaaatgggcaaaggaa 300
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ttcggcattctggccccagctctcagctcttcgcctgcactgtagaaatgggcaaaggaa 500
Query: 301 agccacag--cagagcgagagcaaggatgcgtccagctgcaccagcgagatgtttattga 358
|||||||| |||||||||||| |||||||||||||||||||||| ||||||||||||||
Sbjct: 501 agccacagagcagagcgagagcgaggatgcgtccagctgcaccagtgagatgtttattga 560
Query: 359 atttcagcaacagtaacgtgctagaaccctgcctatcagtcctgatgaacaactcccttg 418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 atttcagcaacagtaacgtgctagaaccctgcctatcagtcctgatgaacaactcccttg 620
Query: 419 ggg 421
|||
Sbjct: 621 ggg 623
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 421
Length of database: 823
Length adjustment: 9
Effective length of query: 412
Effective length of database: 814
Effective search space: 335368
Effective search space used: 335368
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
