CATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA
ATTCTGAATTTCTCGGTTAAAAAGCTCTCTGCTTGAACATTTCTGTTGGA
AATCCCTGCCATTGCTATCGTCAGAGGTCATTAAATGTACAGGGAAAGAG
GCAAGACATGGATGCTCTTCCCTGTCTTAAATGAGCAAGGGTTAGCTCAG
AATGCTGGCAGATGAACAAGTTATATACAGTCTCAGGGACTCCAGTCCCC
TCCTGGGGACTGCGAAATTCTATGTCACCGTGAAGTGGCTCAGAAATGAG
CCGACAAAGAAGTCCACCGACTTTAACGTGAACATGGTTGGATCACACAG
AAGACAAGAATAAATCACCTTACAAATGTGTCTGCTGTAATTTTCCTGTC
TCCTTCCAGTTCCCCACCCCCAGCCCTTTTGTTCTTTGTGGTGTTTTTGT
GAGCAGCAGTGGCAGCAGCAGCAGCAACAGCATCCAGAAGTCCCTGTCTG
GGGATTTTTCTCTGGGTGACTAGGGTGTGAGCTAGGTATTGCTGCAGTGT
GAATCTTTTAAAAATCGCCTAAGACATATTTAAGAGCCTGGTCTAGAAGG
AACGGCTCTCCCAGGCATAATTTTTGGTGCTGGTTGCAGCAGGCAGCGTA
TGCTGCGAGGAAAGTAATATTTTTCTAAATTGGAAGGTGTCAGATGGCCA
CGCAATGTGACTGCTTGTTCCAGATCACTGCCTCCCCTCN

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXTTCACCCTATCCCCCTTCCCTTTGCCTCTGA
GAGAGTGTTCTACATGCACCCACCCCTACCTATCCTCACCAGCATCCCCC
TTCCCTGGGGAATGAAAACTCTACAGGACCCCCACTGAATCCAGACAAGG
CGATTGTCTGCTACATATGTAGCTGGGGCCACAGACCAGCCCATGTATGT
TCTTTGGTTGGTGGCTTAGTCTCTGGGAGCTCTGAGGGGTCCTGGCTAGT
TGATAATGTTGTTCTTCTTATGAGGTTGCAATTTCCTTCAGCTTTTTCAG
TCCTTTCCCTAACTCTTCCACCAGTGGTCCCTGACCAAGTCCAAAGATTA
GCTGTAAGTATCTGCATCTGTCTCAGCCAGCTGCTGGTAGAGCTTCTCAA
AGGACAGCCAAGCTAGGCTCCTGTCTGCAAGTACAACATGGTTTCAGTAA
TAGTGTCAGGATTTAGTGTCTGCACATGGGATGGATCCCATGTTGGGCCA
GTCACTGGATGGCCTTTCCTTCAATCTGTGCTCCATTTGTGTCCCCGAAA
TTACTTTAAACAGGGACAATTCAGGGTAAAAAATTTGAAGATGGGTGGGT
AGCCCATGCCTCAACTGGAGTCCATGTCTATCTATTGGGGCTTGTCTCTT
CGGTTACATCCCCCCCTGTTGAACTTTTTGGTAAGGG

Query= MSMg01no368_l09.b1 MSMg01no368_l09.b1 CHROMAT_FILE:
MSMg01no368_l09.b1 PHD_FILE: MSMg01no368_l09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:06:14 2005
         (569 letters)



>mm_chr18_21886854_21887821
          Length = 968

 Score = 1077 bits (557), Expect = 0.0
 Identities = 563/565 (99%), Gaps = 1/565 (0%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattctgaatttctcggttaaaaagctctctgcttgaacatttctgttggaaatccctg 64
           ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctgaatttct-ggttaaaaagctctctgcttgaacatttctgttggaaatccctg 263

                                                                       
Query: 65  ccattgctatcgtcagaggtcattaaatgtacagggaaagaggcaagacatggatgctct 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 ccattgctatcgtcagaggtcattaaatgtacagggaaagaggcaagacatggatgctct 323

                                                                       
Query: 125 tccctgtcttaaatgagcaagggttagctcagaatgctggcagatgaacaagttatatac 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 tccctgtcttaaatgagcaagggttagctcagaatgctggcagatgaacaagttatatac 383

                                                                       
Query: 185 agtctcagggactccagtcccctcctggggactgcgaaattctatgtcaccgtgaagtgg 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 agtctcagggactccagtcccctcctggggactgcgaaattctatgtcaccgtgaagtgg 443

                                                                       
Query: 245 ctcagaaatgagccgacaaagaagtccaccgactttaacgtgaacatggttggatcacac 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 ctcagaaatgagccgacaaagaagtccaccgactttaacgtgaacatggttggatcacac 503

                                                                       
Query: 305 agaagacaagaataaatcaccttacaaatgtgtctgctgtaattttcctgtctccttcca 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 agaagacaagaataaatcaccttacaaatgtgtctgctgtaattttcctgtctccttcca 563

                                                                       
Query: 365 gttccccacccccagcccttttgttctttgtggtgtttttgtgagcagcagtggcagcag 424
           |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 564 gttccccacccccagcccttttgttctttgtggtgtttttgtaagcagcagtggcagcag 623

                                                                       
Query: 425 cagcagcaacagcatccagaagtccctgtctggggatttttctctgggtgactagggtgt 484
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 cagcagcaacagcatccagaagtccctgtctggggatttttctctgggtgactagggtgt 683

                                                                       
Query: 485 gagctaggtattgctgcagtgtgaatcttttaaaaatcgcctaagacatatttaagagcc 544
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 gagctaggtattgctgcagtgtgaatcttttaaaaatcgcctaagacatatttaagagcc 743

                                    
Query: 545 tggtctagaaggaacggctctccca 569
           |||||||||||||||||||||||||
Sbjct: 744 tggtctagaaggaacggctctccca 768


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 569
Length of database: 968
Length adjustment: 10
Effective length of query: 559
Effective length of database: 958
Effective search space:   535522
Effective search space used:   535522
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)