ATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXCTGATCTTTCCAAGACTTTTAACATGAA
TGGGTGTTGGATTTTGTCAAATGTTTTATCCAGATCTAACCAGATGATCA
TGTGGTTTTTGTCTTTGAGTTTGTTTATATAATGGATTACATTGATGGAT
TTCTGTATATTAAACCATCTCTGCAACCCTGGAATAAAACCTACTTGGTC
AGGATGGATGATTGCTTTAATGTGTTCTTGGATTCAGTTAGCAAGAATTT
TATTGAGTATTGTTGCATCGATATTCATAAGAGAAATTGGTCTGAAGTTC
TCTATCTTTATTGGATCTTTCTGTGGTTTAGGTATCAGAGTAATTGTGGC
TTCATAGAATGAGTTGGCTAGAGCACCTTCTACTTGTATTTTATGGAAAA
TTTTGCACAGAACTGTAATTAGACTTTCTTTGAAGGTCTGATTAATCTTT
GCTCGATAACCGTCTTGTTCCTGGCTTTTTTTTGCTTGTTACACTAATTA
AATGAATGTTTCTTATTCTCTTGGCTGTATTTGCATTTTTTTATTTTCTC
TACATTGTACTTTTATTTTTCTTCCTTTTCTTGTTCTTCTTCTCCCTCTT
CTCTCTCTTTCTCTTCCTTTTTGCTCCTTTCTTTTGTCCCCTTTCCTTTT
TTCCTTCCTTCTCATTCTCTACCTCTTTTCCCCCTCTTCTTTCTTTTCCT
CTTATTCTTTTACTCTCCTTTTTTCCTTCTTCTCTTTTCTCCCCTCTCA

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATT
CTTGACTAAGGTGTTAGTGTAGTTTTTCATCTTTCAGTGGGAAAAAATTG
AGAATTTTGTACATGTTATATTATAAGGCCATGCAGGCACTTTTCTTGTG
CTTCTCAGGGGCTCTGTTGTCCTTTTGCTTTTCATTCTCTGGTATATTTT
CTCTACTGTTTACATCAGGCTACTTGGTTTGTATCCTAAGCAAGCTATCT
TCAGATGAATCCCAATCTCCAGGGTTTTTTTTAAGAACAAAGTGAATAAT
TATTGAAAAAAAGAAGACAGGACATTTATGGAAACATTTTGAAAATTGCA
AAGGACAATATAAAGCATTCTCTTTAATTAAAAAAGAACTCAAATCAATT
ATACTAAAAGGTGACTTTGAGAGTAGAGATCTAATTAGACCATGTATTAG
TCACATGACAACAGAAATAATTGCTATCAGTGGTCCATGGGATAGATAGA
GATGACCCTGAAATGTTACAGTGTCATAACAACTCAGTTTTCCTCACTGG
TCTATTGTGTTGAGATGAATATTGAAGAAAACCATTGAAGTATGTGATAA
CTCCTATGCTTTAATGTAATATGGAAATAAAATTATATCATTTTTAGGGA
TGCCTGAAACATGCTTTTTCCCTTAAACCCTAAAAAAAAAAAAAACAGGG
CCCAAATAATCTTTTCCTAAAACATTTTTAAAACCGAAGAAGTCCCACAA
AAAACCAATCTTAAAATTTTTTAATGAGAN

Query= MSMg01no371_d10.g1 MSMg01no371_d10.g1 CHROMAT_FILE:
MSMg01no371_d10.g1 PHD_FILE: MSMg01no371_d10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:09:33 2005
         (511 letters)



>mm_chr18_88684936_88685845
          Length = 910

 Score =  758 bits (392), Expect = 0.0
 Identities = 431/452 (95%), Gaps = 15/452 (3%)
 Strand = Plus / Minus

                                                                       
Query: 74  gttatattataaggccatgcaggcacttttcttgtgcttctcaggggctctgttgtcctt 133
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 910 gttatattataaggccatgcaggcacttttcttgtgcttctcaggggctctgttgtcctt 851

                                                                       
Query: 134 ttgcttttcattctctggtatattttctctactgtttacatcaggctacttggtttgtat 193
           |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 850 ttgcttttcattctctggtatattttctctactgtttatatcaggctacttggtttgtat 791

                                                                       
Query: 194 cctaagcaagctatcttcagatgaatcccaatctccagggtttttttt--------aaga 245
           ||||||||||||||||||||||||||||||||||||||| ||||||||        ||||
Sbjct: 790 cctaagcaagctatcttcagatgaatcccaatctccaggttttttttttttttgtaaaga 731

                                                                       
Query: 246 acaaagtgaataat------tattgaaaaaaagaagacaggacatttatggaaacatttt 299
           |||||||||||||       |||||||| |||||||||||||||||||||||||||||||
Sbjct: 730 acaaagtgaataaaaaaaaatattgaaataaagaagacaggacatttatggaaacatttt 671

                                                                       
Query: 300 gaaaattgcaaaggacaatataaagcattctctttaattaaaaaagaactcaaatcaatt 359
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 670 gaaaattgcaaaggacaatataaagcattctctttaattaaaaaagaactcaaatcgatt 611

                                                                       
Query: 360 atactaaaaggtgactttgagagtagagatctaattagaccatgtattagtcacatgaca 419
           |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 610 atactaaaaggtgactttgacagtagagatctaattagaccatgtattagtcacatgaca 551

                                                                       
Query: 420 acagaaataattgctatcagtggtccatgggatagatagagatgaccctgaaatgttaca 479
           ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 550 acagaaata-ttgctatcagtggtccatgggatagatagagatgaccctgaaatgttaca 492

                                           
Query: 480 gtgtcataacaactcagttttcctcactggtc 511
           ||||||||||||||||||||||||||||||||
Sbjct: 491 gtgtcataacaactcagttttcctcactggtc 460


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 511
Length of database: 910
Length adjustment: 10
Effective length of query: 501
Effective length of database: 900
Effective search space:   450900
Effective search space used:   450900
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)