NNCCGATGATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXAATACTCGTGGAAGTGAGTCTGTG
AGTGTGCCAGTGTGTAGGTGTGTAGGTACCTGTGTGTGAGTGTTGACAAG
AAGACAACCTTGAATGTTGTTCCTCAGGCGCTCTCCATTTTGTCTTTTTG
AGACAGGTTCTCTCATTGGCTTAGAGTTTGCCATGTTGACTGCGCTGCCT
GGTCAGCGAGTCCCAGAGATTTGTTTTTTTTTTCTTCTTCTTCTTCTTCT
TCCTGAGTTCTGGGGTTTCAAGAGCATGCCACCATGCCTGGCTTTTTTTT
TTTAAATAGGTTCTGGGGGTTTAACTAAGGTCCTTTTACTTGCAAGGACA
TAACTTCACCAACTGAGCTCTCTCTCCATGGACAATTGTGAGAGGAAGCC
CTAACCCTAACCCTGTACCATTAAGGTCTGTTTCTAGAAGATAATGTGCA
TCCCTTCAGACTTACTGTGCAATAAACCAACAAGACTGAGCTCTGCCCGG
TGCTGGAGGCATCGCTTGGCTCTGCCCGGTGCTGGAGGAATCGCTTGGCT
CTGCCCGGTGCTGGAAGAATCGCTTGGGTCTGCCCCGGGCGGGAGACATC
CCTTTGCCCTTCCTCGGTGATGGAAAGCACTCCTTTGCTTTTGCTCCGCG
TGGGTATATTCTTTTTTTTTCTTACCTTTTGCGTTATGTTATCATTTTTT
CTTCTTCTCCGTTAT

TCAATAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCTCACCTGTTGACTACCGAATGGCAGAGAAACACCTGAAAAAATGT
TCAACATCCTTAATCATCAGGGAAATGCAAATCAAAACAACCCTGAGATT
CCACCTCACACCAGTCAGAATGGCTAAGATCAAAAATTCAGGTGACAGCA
GATGCTGGTGTGGATGTGGAGAAAGAGGAACACTTCTCCATTGTTGGTGG
GATTGCAGGCTTGTACAACCACTCTGGAAATCAGTCTGGCGGTTCCTCAG
AAAATTGGACATAGTACTACTGGAGGATCCAGCAATACCTCTCCTGGGCA
TATATCCAGAAGATGCCCCAACTGGTAAGAAGGACACATGCTCCACTATG
TTCATAGCAGCCTTATTTATAATAGCCAGAAGCTGGAAAGAACCCAGATG
CCCCTCAACAGAGGAATGGATACAGAAAATGTGGTAAACCTACACAATGG
AGTACTACTCAGCTATTAAAAAGAATGAATTTATGAAATTCCTAGCCAAA
TGGATGGACCTGGAGGGCATCATCCTGAGTGAGGTAACACATTCACAAAG
AAACTCACACAATATGTACTCACTGATAAGTGGATATTTACCCCCAACCT
AGGATACCCCAGATAATAAATACAATTGGCTAACCCCTGAAACTCCCAAA
AATGAAGACAGAAGTGGGGACCCTATGCCCCTCCTTAAAATTGGGAAAAA
AAACCCCTGGGAAGAGGTA

Query= MSMg01no371_e17.b1 MSMg01no371_e17.b1 CHROMAT_FILE:
MSMg01no371_e17.b1 PHD_FILE: MSMg01no371_e17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:09:40 2005
         (466 letters)



>mm_chr18_25211097_25211962
          Length = 866

 Score =  735 bits (380), Expect = 0.0
 Identities = 436/470 (92%), Gaps = 26/470 (5%)
 Strand = Plus / Plus

                                                                       
Query: 1   aatactcgtggaagtgagtctgtgagtgtgccagtgtgtaggtgtgtaggtacctgtgtg 60
           |||||||| |||||||||||||||||||||||        ||||||||||||||||||||
Sbjct: 219 aatactcggggaagtgagtctgtgagtgtgcc--------ggtgtgtaggtacctgtgtg 270

                                                                       
Query: 61  tgagtgttgacaagaagacaaccttgaatgttgttcctcaggcgctctccattttgtctt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 271 tgagtgttgacaagaagacaaccttgaatgttgttcctcaggcgctctccattttgtctt 330

                                                                       
Query: 121 tttgagacaggttctctcattggcttagagtttgccatgttgactgcgctgcctggtcag 180
           |||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||
Sbjct: 331 tttgagacaggttctctcattaacttagagtttgccatgttgactgcgctgcctggtcag 390

                                                                       
Query: 181 cgagtcccagagatttgttttttttttcttcttcttcttcttcttcctgagttctggggt 240
           ||||||||||||||||||||||||||              ||||||||||||||||||||
Sbjct: 391 cgagtcccagagatttgttttttttt--------------ttcttcctgagttctggggt 436

                                                                       
Query: 241 ttcaagagcatgccaccatgcctggc----tttttttttttaaataggttctgggggttt 296
           || ||||||||||||||||||||| |    |||||||||||||||||||||| |||||||
Sbjct: 437 ttaaagagcatgccaccatgcctgcctttttttttttttttaaataggttctaggggttt 496

                                                                       
Query: 297 aactaaggtccttttacttgcaaggacataacttcaccaactgagctctctctccatgga 356
           ||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||
Sbjct: 497 aactaaggtccttttacttgcgaggacataacttcaccaactgagctatctctccatgga 556

                                                                       
Query: 357 caattgtgagaggaagccctaaccctaaccctgtaccattaaggtctgtttctagaagat 416
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 557 caattgtgagaggaagccctaaccctaaccctgtaccattaaggtctgtttctagaagat 616

                                                             
Query: 417 aatgtgcatcccttcagacttactgtgcaataaaccaacaagactgagct 466
           ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 617 aatgtgcatcccttcagacttactgtgcaataaaccaacaagactgagct 666


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 466
Length of database: 866
Length adjustment: 10
Effective length of query: 456
Effective length of database: 856
Effective search space:   390336
Effective search space used:   390336
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)