CTTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCG
GAATTCAGAGATTTACGCCTGCCCGGTCAGGGACACGGAGCCCCTTAATG
ATGCGGAAAAAAATGGGACTCCAAGTCACATACTCTAAGATCTAAGCCAT
CCTCACTAGTAAATGTGAGTTAACTAAAGCGGTGGGGGAATGGAGAAATA
CAGCTCACTAGCCTTCTAACCAAGGTCTGCCCTCCAGGCACATGGGGGAG
GCACTAAGCAGTCCTCACAGAGGAATAGACAGGATTTATTGACTTTCACC
CTAAGAAGTCCATGCTATGCTGTATGGATTCTATATTCACTGAGCTGCTG
TTATTTTTGCATTTTTTAAAATGTTATATGTAGGTAAATCTAATGCACAA
GAGGAAAAAGATATCTTTAATCTCAGCTATGATTGATAGACATTAAGAAT
ATTACTATACATAATACATTTATATAATCCATCAATCTGATGCCCCCCAT
TAAAGAAAACACATTTTTTTTCACAAAGGTCATTTAAAACCTGAAACTGT
ACCATTACAGTCATGAATGAATGGATGACCAGAACACATGTCATGTGATC
TCCCTTCCTGTCATAATTCAGTTAAGATGAAAATAGTAAGGAAATAAATT
TGAAAAAAATCTCATTAATTATACCATTTGATATATTTTCAGCATCCAAT
TATTACACAAAGTATATAATGGGGCCCAAGGTTTTAATTCTCTTAAGCTA
ATTCTATTCTAAATCCCGACTTCTAAAGAAATTT

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXTCACCTGAGGAATACCGAATGGCAGAGAAGCACCTGAAAAAATGC
TCAACATCCTTAATCATCAGGGAAATGCAAATCAAAACAACCCTGAGATT
CCACCTCACACCAGTCAGAATGGCTAAGATCAAAAATTCAGGTGACAGCA
GATGCTGGCGAGGATGTGGAGAAAGAGGAACACTCCTCCATTGTTGGTGG
GATTGCAGGCTTGTACAACCACTCTGGAAATCAGTCTGGCGGTTCCCCAG
AAAATTGGACATAGTACTACCGGAGGATCCAGCAATACCTCTCCTGGGCA
TATATCCAGAAGATGCCCCAACTGGTAAGAAGGACACATGCTCCACTATG
TTCATAGCAGTCTTGTTTATAATAGCCAGAAGCTGGAAAGAACCCAGATG
CCCCTCAACAGAGGAATGGATACAGAAAATGTGGTACATCTACACAATGG
AGTACTACTCAGCTATTAAAAAGAATGAATTTATGAAATTCCTAGGCAAA
TGGATGGACCTGGAGGGCATCATCCTGAGTGAGGTAACACATTCACAAAG
GAACTCACACAATATGTACTCACTGATAAGTGGATATTAGCCCCAAACCT
AGGATACCCAAGATAATAAAAAACAATTGCTTAAACCCTGAAACTCAGGA
AAAATGGAAGACTGAAGGGTGGGACCTAAGGCCCTCCTTTAAAATTGGAA
CAAAAAACCCTCTGGG

Query= MSMg01no374_e13.b1 MSMg01no374_e13.b1 CHROMAT_FILE:
MSMg01no374_e13.b1 PHD_FILE: MSMg01no374_e13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:13:28 2005
         (615 letters)



>mm_chr18_25212489_25213503
          Length = 1015

 Score = 1114 bits (576), Expect = 0.0
 Identities = 603/612 (98%), Gaps = 2/612 (0%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattcagagat-ttacgcctgcccggtcagggacacggagccccttaatgatgcggaaa 63
           ||||||||||||  || |||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 815 gaattcagagataatatgcctgcccggtcagggacacggagccccttaatgatgcgg-aa 757

                                                                       
Query: 64  aaaatgggactccaagtcacatactctaagatctaagccatcctcactagtaaatgtgag 123
           ||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 756 aaagtgggactccaagtcacatcctctaagatctaagccatcctcactagtaaatgtgag 697

                                                                       
Query: 124 ttaactaaagcggtgggggaatggagaaatacagctcactagccttctaaccaaggtctg 183
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 696 ttaactaaagcggtgggggaatggagaaatacagctcactagccttctaaccaaggtctg 637

                                                                       
Query: 184 ccctccaggcacatgggggaggcactaagcagtcctcacagaggaatagacaggatttat 243
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 636 ccctccaggcacatgggggaggcactaagcagtcctcacagaggaatagacaggatttat 577

                                                                       
Query: 244 tgactttcaccctaagaagtccatgctatgctgtatggattctatattcactgagctgct 303
           ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 576 tgagtttcaccctaagaagtccatgctatgctgtatggattctatattcactgagctgct 517

                                                                       
Query: 304 gttatttttgcattttttaaaatgttatatgtaggtaaatctaatgcacaagaggaaaaa 363
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 516 gttatttttgcattttttaaaatgttatatgtaggtaaatctaatgcacaagaggaaaaa 457

                                                                       
Query: 364 gatatctttaatctcagctatgattgatagacattaagaatattactatacataatacat 423
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 456 gatatctttaatctcagctatgattgatagacattaagaatattactatacataatacat 397

                                                                       
Query: 424 ttatataatccatcaatctgatgccccccattaaagaaaacacattttttttcacaaagg 483
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 396 ttatataatccatcaatctgatgccccccattaaagaaaacacattttttttcacaaagg 337

                                                                       
Query: 484 tcatttaaaacctgaaactgtaccattacagtcatgaatgaatggatgaccagaacacat 543
           |||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||
Sbjct: 336 tcatttaaaacctgaaactgtaccattacagtcatgaatgaatggatgaccagggcacat 277

                                                                       
Query: 544 gtcatgtgatctcccttcctgtcataattcagttaagatgaaaatagtaaggaaataaat 603
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 276 gtcatgtgatctcccttcctgtcataattcagttaagatgaaaatagtaaggaaataaat 217

                       
Query: 604 ttgaaaaaaatc 615
           ||||||||||||
Sbjct: 216 ttgaaaaaaatc 205


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 615
Length of database: 1015
Length adjustment: 10
Effective length of query: 605
Effective length of database: 1005
Effective search space:   608025
Effective search space used:   608025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)