Query= MSMg01no374_i10.b1 MSMg01no374_i10.b1 CHROMAT_FILE:
MSMg01no374_i10.b1 PHD_FILE: MSMg01no374_i10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:13:47 2005
(528 letters)
>mm_chr18_61373607_61374533
Length = 927
Score = 982 bits (508), Expect = 0.0
Identities = 523/528 (99%), Gaps = 1/528 (0%)
Strand = Plus / Minus
Query: 1 gccaagatcacatttcacttcaagtgtccatctcctacagttcttagcctgtgttcccga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 727 gccaagatcacatttcacttcaagtgtccatctcctacagttcttagcctgtgttcccga 668
Query: 61 aagcaacctggacactgtagcttgtgactgcttattttctctatctaaatatttataaca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 667 aagcaacctggacactgtagcttgtgactgcttattttctctatctaaatatttataaca 608
Query: 121 agcgatgtgaactccttcacagtgggtatgagaatcacatttctattttttctccaaatc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 607 agcgatgtgaactccttcacagtgggtatgagaatcacatttctattttttctccaaatc 548
Query: 181 agattttatatattccaagtgcccaccccacagtgctggcaggacattcaatcccaatcc 240
|||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 547 agattttatatactccaagtgcccatcccacagtgctggcaggacattcaatcccaatcc 488
Query: 241 tgataacagatagtctctccttatgatcatgtgacgctttgcttggccagccccataaga 300
||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 487 tgataacagatagtc-caccttatgatcatgtgacgctttgcttggccagccccataaga 429
Query: 301 accttctggctgatactctacgttgatggcgtggtcccctgaaatgcactgagtcttctc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 accttctggctgatactctacgttgatggcgtggtcccctgaaatgcactgagtcttctc 369
Query: 361 tcatctggggctcagaagccttgcagtgcttggccttcctagtataggtcccccattctc 420
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 tcatctagggctcagaagccttgcagtgcttggccttcctagtataggtcccccattctc 309
Query: 421 tggagtaccaacagcacaggagcataagagacgcagctacctccccagtgaaggaaaatc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 tggagtaccaacagcacaggagcataagagacgcagctacctccccagtgaaggaaaatc 249
Query: 481 ccaaaaccgtttcattcaaaaagcctgcaaagatttttttccttgacc 528
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 ccaaaaccgtttcattcaaaaagcctgcaaagatttttttccttgacc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 528
Length of database: 927
Length adjustment: 10
Effective length of query: 518
Effective length of database: 917
Effective search space: 475006
Effective search space used: 475006
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no374_i10.g1 MSMg01no374_i10.g1 CHROMAT_FILE:
MSMg01no374_i10.g1 PHD_FILE: MSMg01no374_i10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:13:47 2005
(398 letters)
>mm_chr18_61186121_61186918
Length = 798
Score = 746 bits (386), Expect = 0.0
Identities = 395/398 (99%)
Strand = Plus / Plus
Query: 1 catccctgggacccacaaggccaaagcagatgtagttaaacatgtttaaaaagctaggac 60
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 catccctgggacctacaaggccaaagcagatgtagttaaacatgtttaaaaagctaggac 260
Query: 61 tatttgttctcagaaacacactagagcccatcacacagagaatggctttccacaatcgtc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tatttgttctcagaaacacactagagcccatcacacagagaatggctttccacaatcgtc 320
Query: 121 tccagccttgggatgtacagtttcacccgagatgaagagggctccttgtgcgatacctgg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tccagccttgggatgtacagtttcacccgagatgaagagggctccttgtgcgatacctgg 380
Query: 181 catacagcaggtacacacagagatggatggagcctattctttcccaacagcggtggggtg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 catacagcaggtacacacagagatggatggagcctattctttcccaacagcggtggggtg 440
Query: 241 gcccctgtgggaatgtcagaaaatggggctgtgtcctactggtatgctgcatttgtaagg 300
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gcccctgtgggaatgccagaaaatggggctgtgtcctactggtatgctgcatttgtaagg 500
Query: 301 ttccttccaacttggaagcaggaggctcccaatgtttgttgatccttacattgtgtttgt 360
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 501 ttccttccaacttggaagcaggaggctcccaatgtttgttgatccttagattgtgtttgt 560
Query: 361 tattattgctgaaagaaatctagggctgatttcccagt 398
||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tattattgctgaaagaaatctagggctgatttcccagt 598
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 398
Length of database: 798
Length adjustment: 9
Effective length of query: 389
Effective length of database: 789
Effective search space: 306921
Effective search space used: 306921
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
