Query= MSMg01no374_m08.b1 MSMg01no374_m08.b1 CHROMAT_FILE:
MSMg01no374_m08.b1 PHD_FILE: MSMg01no374_m08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:14:07 2005
(457 letters)
>mm_chr18_45495447_45496303
Length = 857
Score = 853 bits (441), Expect = 0.0
Identities = 453/457 (99%)
Strand = Plus / Plus
Query: 1 atattctgaggaatggtgacatttttaccagtgagaacttccaggagtaccatatctcat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 atattctgaggaatggtgacatttttaccagtgagaacttccaggagtaccatatctcat 260
Query: 61 gccactggatcctccttccagaaagagcagaaagtacttcctaaaagctgatgactgcat 120
|||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 261 gccactgggtcctccttccagaaagagcagaaagtacttcctgaaagctgatgactgcat 320
Query: 121 ctagcacaggcaatatttcttttgtcgactgtatgaaagatcagggtacaacaatggttt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ctagcacaggcaatatttcttttgtcgactgtatgaaagatcagggtacaacaatggttt 380
Query: 181 tcacatgaatatgctgaacagttctattactgactcttaatcgtgagccataggcatgga 240
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tcacatgattatgctgaacagttctattactgactcttaatcgtgagccataggcatgga 440
Query: 241 ctaatgatcttattcttactctttagtctgtgacttcagagtcacccccagtcttcaaaa 300
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ctaatgaacttattcttactctttagtctgtgacttcagagtcacccccagtcttcaaaa 500
Query: 301 gctggggttttaaagcatgatggaggtttttgtccccatgaatgcctgatgtttgcactg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gctggggttttaaagcatgatggaggtttttgtccccatgaatgcctgatgtttgcactg 560
Query: 361 gtctgtggctacattctctccaccagctcatagccaaatgctggaccactcctgtgagtg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gtctgtggctacattctctccaccagctcatagccaaatgctggaccactcctgtgagtg 620
Query: 421 tctgtgccaaatctttaaatctctcctttgctgaaga 457
|||||||||||||||||||||||||||||||||||||
Sbjct: 621 tctgtgccaaatctttaaatctctcctttgctgaaga 657
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 457
Length of database: 857
Length adjustment: 10
Effective length of query: 447
Effective length of database: 847
Effective search space: 378609
Effective search space used: 378609
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no374_m08.g1 MSMg01no374_m08.g1 CHROMAT_FILE:
MSMg01no374_m08.g1 PHD_FILE: MSMg01no374_m08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:14:07 2005
(435 letters)
>mm_chr18_45687832_45688666
Length = 835
Score = 642 bits (332), Expect = 0.0
Identities = 385/430 (89%), Gaps = 42/430 (9%)
Strand = Plus / Minus
Query: 1 aaagaataagtaaatgaaacaagtcagtctaattgtcattgcttttgtatacccccaccc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 430 aaagaataagtaaatgaaacaagtcagtctaattgtcattgcttttgtatacccccaccc 371
Query: 61 ccaagttcagactcaattctttcttttgtggaactttctggtttgactttttatgttttg 120
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 370 ccaagttcagactcacttctttcttttgtggaactttctggtttgactttttatgttttg 311
Query: 121 ctcttttcacatatattaaaaatcttcatcacagttttaataatttcaaattcaagggaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 310 ctcttttcacatatattaaaaatcttcatcacagttttaataatttcaaattcaagggaa 251
Query: 181 acctaaacttgattcttttacaatctcagctagtcttagagttgagcagcctctctctct 240
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 250 acctaaacttggttcttttacaatctcagctagtcttagagttgagcagcctctctctct 191
Query: 241 ctctctctctctctct------------------------------------------ct 258
|||||||||||||||| ||
Sbjct: 190 ctctctctctctctctttctctctctctctctctctctctctctctctctctctctctct 131
Query: 259 ctctctctgtctctgtctcatacacacacacacacacacacacactaataacccggctaa 318
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 130 ctctctctctctctgtctcatacacacacacacacacacacacactaataacccggctaa 71
Query: 319 atttaccaataggcactatataactagaagaccagtctacattgaacagaaaatattcat 378
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 70 atttaccaataggcactatataactagaagaccagtctacattgaacagaaaatattcat 11
Query: 379 ttttcaagaa 388
||||||||||
Sbjct: 10 ttttcaagaa 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 59
Number of extensions: 20
Number of successful extensions: 20
Number of sequences better than 10.0: 1
Number of HSP's gapped: 15
Number of HSP's successfully gapped: 1
Length of query: 435
Length of database: 835
Length adjustment: 9
Effective length of query: 426
Effective length of database: 826
Effective search space: 351876
Effective search space used: 351876
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
