Query= MSMg01no376_o21.b1 MSMg01no376_o21.b1 CHROMAT_FILE:
MSMg01no376_o21.b1 PHD_FILE: MSMg01no376_o21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:16:56 2005
(434 letters)
>mm_chr18_59604381_59605210
Length = 830
Score = 737 bits (381), Expect = 0.0
Identities = 417/431 (96%), Gaps = 4/431 (0%)
Strand = Plus / Minus
Query: 4 ggaattcttgactcttaatcactttttgcttctttagccaacccccttccagatccagca 63
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 630 ggaattcttgactcttaatcagtttttgcttctttagccaacccccttccagatccagca 571
Query: 64 gtaaaatataattcttggaagatagtattaagttgccacagtagaaaccactacagtaac 123
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 570 gtaaaatataattcttggaagatagtattaagttgccacagtagaaaccactatagtaac 511
Query: 124 aagccccccaaattccaagaagtacatagcatttacctcacaagtttgccaaacccagac 183
||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 510 aagccccccaaatcccaagaggtacatagcatttacctcacaagtttgccaaacccagac 451
Query: 184 catgaaacaccctcctaatgatgaaggaatgcaaataaggccatatcaaaggcatttttt 243
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 450 catgaaacaccctcctaatgatgaagggatgcaaataaggccatatcaaaggcatttttt 391
Query: 244 atctaataccttgggagcaagaaaaggtgcatcagaaaactttctgttacccccaggcca 303
||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||
Sbjct: 390 atctaataccttgggagcaagaaaaggtgcatcagaaaactttttgttactcccaggcca 331
Query: 304 gcaaactctttatacctcaaaaacaggctagccctttctttgagaattcactaggcaaga 363
||||||||||||||||||||||| || |||||||||| |||||||||||||||||||
Sbjct: 330 gcaaactctttatacctcaaaaatagtctagcccttt----gagaattcactaggcaaga 275
Query: 364 tgtcatgccaatgggtcaactcttcaatctagaacagggcaatggcagagtctgaattga 423
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 274 tgtcatgccaaagggtcaactcttcaatctagaacagggcaatggcagagtctgaattga 215
Query: 424 gcaactctgac 434
|||||||||||
Sbjct: 214 gcaactctgac 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 434
Length of database: 830
Length adjustment: 9
Effective length of query: 425
Effective length of database: 821
Effective search space: 348925
Effective search space used: 348925
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no376_o21.g1 MSMg01no376_o21.g1 CHROMAT_FILE:
MSMg01no376_o21.g1 PHD_FILE: MSMg01no376_o21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:16:57 2005
(465 letters)
>mm_chr18_59433957_59434821
Length = 865
Score = 862 bits (446), Expect = 0.0
Identities = 446/446 (100%)
Strand = Plus / Plus
Query: 1 attgttaacaaggagtctttccctcttcaaagactgcatctggtcttctttattttttct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 attgttaacaaggagtctttccctcttcaaagactgcatctggtcttctttattttttct 260
Query: 61 tcgctgtatcaaattatgactttattattaaatgttcccagtgctggaagaagttatcca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tcgctgtatcaaattatgactttattattaaatgttcccagtgctggaagaagttatcca 320
Query: 121 tgtgtcaatattgtaatttataacactagatgaatgacttctcagacctttccctgagga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgtgtcaatattgtaatttataacactagatgaatgacttctcagacctttccctgagga 380
Query: 181 tagaatttaacacagtaatgggaatttgaatgagtttggatagctggagatgatgtgcct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tagaatttaacacagtaatgggaatttgaatgagtttggatagctggagatgatgtgcct 440
Query: 241 tagaaattagaagtaaggggcaggttttataggcatgtctgcattgatatgtttgtattt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tagaaattagaagtaaggggcaggttttataggcatgtctgcattgatatgtttgtattt 500
Query: 301 tctttcagcagattatagtaatgcagaatatgcattttattatatgccaggagatttgat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tctttcagcagattatagtaatgcagaatatgcattttattatatgccaggagatttgat 560
Query: 361 actaaagaaagggcatggacagcatggttattcttgtagtaacatttgcctttttaaata 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 actaaagaaagggcatggacagcatggttattcttgtagtaacatttgcctttttaaata 620
Query: 421 ataataataataataataataataat 446
||||||||||||||||||||||||||
Sbjct: 621 ataataataataataataataataat 646
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 8
Number of successful extensions: 8
Number of sequences better than 10.0: 1
Number of HSP's gapped: 8
Number of HSP's successfully gapped: 1
Length of query: 465
Length of database: 865
Length adjustment: 10
Effective length of query: 455
Effective length of database: 855
Effective search space: 389025
Effective search space used: 389025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
