Query= MSMg01no378_o21.b1 MSMg01no378_o21.b1 CHROMAT_FILE:
MSMg01no378_o21.b1 PHD_FILE: MSMg01no378_o21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:19:32 2005
(423 letters)
>mm_chr18_87800430_87801252
Length = 823
Score = 787 bits (407), Expect = 0.0
Identities = 416/419 (99%)
Strand = Plus / Plus
Query: 5 gaattcattgtctcaactgagctctttgtcttcagctaaaaagtcagatagaaacatagt 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcattgtctcaactgagctctttgtcttcagctaaaaagtcagatagaaacatagt 264
Query: 65 cacagcttctctcctttttcctcttccttctggtcttctgtccgtcacagtaggagaaga 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 cacagcttctctcctttttcctcttccttctggtcttctgtccgtcacagtaggagaaga 324
Query: 125 agactgaggagagaagtaacaaaattgatccttcatgaggagctgactctacatagaacg 184
||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 325 agactgaggagagaaataacaaaattgatccttcatgaggatctgactctacatagaacg 384
Query: 185 aggcgatattttcaaaggcattacaaaatagtaaataaaaatatatttctattaagtaaa 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 aggcgatattttcaaaggcattacaaaatagtaaataaaaatatatttctattaagtaaa 444
Query: 245 acataagtaaatagcaattacttaaattataaactatagttaattttaagttattgctca 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 acataagtaaatagcaattacttaaattataaactatagttaattttaagttattgctca 504
Query: 305 ttacttgtcattttagaaaagcagacgaggtcttttcaattagaaaacaaaacattcagt 364
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 505 ttacttgtcattttagaaaagcagacgaggtctttgcaattagaaaacaaaacattcagt 564
Query: 365 atcctatggtttttatgtggagtaaaagtagaagggaagaagctctatttatctcctag 423
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 atcctatggtttttatgtggagtaaaagtagaagggaagaagctctatttatctcctag 623
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 423
Length of database: 823
Length adjustment: 9
Effective length of query: 414
Effective length of database: 814
Effective search space: 336996
Effective search space used: 336996
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no378_o21.g1 MSMg01no378_o21.g1 CHROMAT_FILE:
MSMg01no378_o21.g1 PHD_FILE: MSMg01no378_o21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:19:32 2005
(533 letters)
>mm_chr18_88042086_88043018
Length = 933
Score = 1015 bits (525), Expect = 0.0
Identities = 531/533 (99%), Gaps = 1/533 (0%)
Strand = Plus / Minus
Query: 1 acaactgaggaatctcaaatgactgagaagagcctaaagaaatgttcaaagtccttagta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 886 acaactgaggaatctcaaatgactgagaagagcctaaagaaatgttcaaagtccttagta 827
Query: 61 atcagagaaatggatatctaaaggacccaggaattccacctaacaacaatcagaatgact 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 826 atcagagaaatggatatctaaaggacccaggaattccacctaacaacaatcagaatgact 767
Query: 121 aagatcaaaacctcaggtgataacacatgttgaaagaggatgtggagaaagatgaatgct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 766 aagatcaaaacctcaggtgataacacatgttgaaagaggatgtggagaaagatgaatgct 707
Query: 181 cctccattgctggtcgagttgcaaactggtacaaacactctggaaatcaatctggaggtt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 706 cctccattgctggtcgagttgcaaactggtacaaacactctggaaatcaatctggaggtt 647
Query: 241 cctcagaaaattggaaataggtctatcaagctcttttgcatttcatttagatggcaaaag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 646 cctcagaaaattggaaataggtctatcaagctcttttgcatttcatttagatggcaaaag 587
Query: 301 cagttgagctgcataatttaataactcttatttcacccttgataaacttcactttctgcc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 586 cagttgagctgcataatttaataactcttatttcacccttgataaacttcactttctgcc 527
Query: 361 accaaggataaaacagcattagttaatttttagattttcattttttctactccccccact 420
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 526 atcaaggataaaacagcattagttaatttttagattttcattttttctactccccccact 467
Query: 421 tttttttttcttttttcttctttttcttcttttgaggacaccaggtttgagaactaaaca 480
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 466 tttttttt-cttttttcttctttttcttcttttgaggacaccaggtttgagaactaaaca 408
Query: 481 agttactctaaatgcattttaaagttcatttgatacctctgcggtaaaaatgt 533
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 407 agttactctaaatgcattttaaagttcatttgatacctctgcggtaaaaatgt 355
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 533
Length of database: 933
Length adjustment: 10
Effective length of query: 523
Effective length of database: 923
Effective search space: 482729
Effective search space used: 482729
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
