Query= MSMg01no382_c24.b1 MSMg01no382_c24.b1 CHROMAT_FILE:
MSMg01no382_c24.b1 PHD_FILE: MSMg01no382_c24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:23:51 2005
(577 letters)
>mm_chr18_76451785_76452762
Length = 978
Score = 1031 bits (533), Expect = 0.0
Identities = 565/581 (97%), Gaps = 12/581 (2%)
Strand = Plus / Plus
Query: 7 gaattcccagcaattc---atggtggctcacaaacatctgtaatggggtcagatgccctc 63
||||||||||||| | |||||||||||||||||||||||||||||||||||||||||
Sbjct: 200 gaattcccagcaa--ccacatggtggctcacaaacatctgtaatggggtcagatgccctc 257
Query: 64 ttctggtgtgtctgaaaacaactacagtgtacttatattatt------aaaaaaaaaaaa 117
|||||||||||||||| ||| ||||||||||||||||||||| ||||||||||||
Sbjct: 258 ttctggtgtgtctgaagacagctacagtgtacttatattatttaaaaaaaaaaaaaaaaa 317
Query: 118 tccaggctaggtcagtcctgaatcattgagtcatgttacttttttctctctcgatacatt 177
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 318 tccaggctaggtcagtcctgaatcattgagtcatgttacttttttctctctcgatacatt 377
Query: 178 ggtatagtctgaaatcagagctgtgtgtccatccaggcctggtgcccactagtgtttttg 237
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 ggtgtagtctgaaatcagagctgtgtgtccatccaggcctggtgcccactagtgtttttg 437
Query: 238 ttttgttgctttatttttaatgagaataccaatgtctttgaatcgtatgagaggcatcta 297
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 438 ttttgttgctttatttttaatgagaataccaatgtctttgaatcgtatgagaggcatcta 497
Query: 298 taaagttaggtttttt-gctgttgtcccaaaatatatattcatgaaccaggtgataagta 356
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 498 taaagttaggtttttttgctgttgtcccaaaatatatattcatgaaccaggtgataagta 557
Query: 357 gtatctaaaaaaatatgccaagaaagctggattatggtactagcggtgttatggattcac 416
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 558 gtatctaaaaaaatatgccaagaaagctggattatggtactagcggtgttatggattcac 617
Query: 417 ctacaagagatggattagagcttcaattgcaaactcaatcttggtttttattataataca 476
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 618 ctacaagagatggattagagcttcaattgcaaactcaatcttggtttttattataataca 677
Query: 477 taatttcttggttttccaagtgattaattgcttgtatttggtagctgagagaaaaagaag 536
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 678 taatttcttggttttccaagtgattaattgcttgtatttggtagctgagagaaaaagcag 737
Query: 537 tattcaaatcaactatacttgacttgttctaaacttttcta 577
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 738 tattcaaatcaactatacttgacttgttctaaacttttcta 778
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 577
Length of database: 978
Length adjustment: 10
Effective length of query: 567
Effective length of database: 968
Effective search space: 548856
Effective search space used: 548856
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no382_c24.g1 MSMg01no382_c24.g1 CHROMAT_FILE:
MSMg01no382_c24.g1 PHD_FILE: MSMg01no382_c24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:23:51 2005
(456 letters)
>mm_chr18_76625161_76626012
Length = 852
Score = 758 bits (392), Expect = 0.0
Identities = 434/456 (95%), Gaps = 14/456 (3%)
Strand = Plus / Minus
Query: 1 cttccagtggcctgagcccctccctatggggaggttggcattttcctttgaactggctta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 729 cttccagtggcctgagcccctccctatggggaggttggcattttcctttgaactggctta 670
Query: 61 tttgatatgtgttctgggcttttctatgagttcctctggccactggttcagctcccagtt 120
||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 669 tttgatatgtgttctgg----------gagttcctctggccactggttcagctcccagtt 620
Query: 121 ccctcccaccctggtgaaggcttctctagtaactcagactgacagcagaaactctctgcg 180
|||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 619 ccctcccaccctggtgaaggcttctctagtaactcagactgaaagcagaaactctctgca 560
Query: 181 tcgaagtgtctcatgtcttccccaagggtcattctactctcccactttctgttcaagctt 240
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 559 tggaagtgtctcatgtcttccccaagggtcattctactctcccactttctgttcaagctt 500
Query: 241 agatttctgcttcccagaaagcctgcccacaccccccccaacccccccagtccccaatag 300
||||||||||||||||||||||||||||||| ||||||| |||||| |||||| ||
Sbjct: 499 agatttctgcttcccagaaagcctgcccacatccccccc----cccccaacccccaacag 444
Query: 301 atctacctactttcctctttttcacactaatcctcttccttagtggctccttccttggat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 atctacctactttcctctttttcacactaatcctcttccttagtggctccttccttggat 384
Query: 361 tccatgactctccttcattctgcaaaaccactcccctgggctttgtttgtgcaccgctcc 420
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 383 tccatgactctccttcattctgcaaaaccactcccctggggtttgtttgtgcaccgctcc 324
Query: 421 catggctgcccacgcctctcttctattcatgagaaa 456
||||||||||||||||||||||||||||||||||||
Sbjct: 323 catggctgcccacgcctctcttctattcatgagaaa 288
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 4
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 456
Length of database: 852
Length adjustment: 10
Effective length of query: 446
Effective length of database: 842
Effective search space: 375532
Effective search space used: 375532
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
