Query= MSMg01no382_g07.b1 MSMg01no382_g07.b1 CHROMAT_FILE:
MSMg01no382_g07.b1 PHD_FILE: MSMg01no382_g07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:24:07 2005
(515 letters)
>mm_chr18_26332800_26333721
Length = 922
Score = 949 bits (491), Expect = 0.0
Identities = 507/517 (98%), Gaps = 9/517 (1%)
Strand = Plus / Plus
Query: 5 gaattcattatctgctcattggattaacatagactaacaatt-------tcaaatatcag 57
|||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 205 gaattcattatctgctcattggattaacatagactaacaatttcaaatatcaaatatcag 264
Query: 58 atgagagaggaaataacaactacaagaagaaatgcctgtctccagttcatggacatgaga 117
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 atgagagaggaaataacaactacaagaagaaatgcctgtctccagttcatggacatgaga 324
Query: 118 agggagagtccattttaccccaaaattggtttaaaacatagaaaaggaatgttgcataca 177
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 agggagagtccattttaccccaaaattggtttaaaacatagaaaaggaatgttgcataca 384
Query: 178 gaaattggacagagctagagataatatacatgtggaataggcctttgtgatggaaacata 237
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 gaaattggacagagctagagataatatacatgtggaataggcctttgtgatggaaacata 444
Query: 238 cctgttaagcacacagacatgtaatgcccacatagacatacagaacccatcagctggaca 297
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 445 cctgttaagcacacagacatgtaatgcccatatagacatacagaacccatcagctggaca 504
Query: 298 taggtggctagataaagatatgggtaggcacaaagaccaagtgtgtctagtagcacaaag 357
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 taggtggctagataaagatatgggtaggcacaaagaccaagtgtgtctagtagcacaaag 564
Query: 358 cctacaggagacaaatatttacagatgttctgtgtgtgagagccctgaaagttttctctc 417
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 cctacaggagacaaatatttacagatgttctgtgtgtgagagccctgaaagttttctctc 624
Query: 418 tttacttctccttctccctctctcccccatctctacttgtttcccacctccctgtggggt 477
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 tttacttctccttctccctctctcccccatctctacttgtttcccacctccctgtggggt 684
Query: 478 gtgtgtctgtgtgtgtgtgtgtctgtgtgtgtgtgtc 514
|||||||||||||||||||| |||||||||||||||
Sbjct: 685 gtgtgtctgtgtgtgtgtgt--ctgtgtgtgtgtgtc 719
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 44
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 515
Length of database: 922
Length adjustment: 10
Effective length of query: 505
Effective length of database: 912
Effective search space: 460560
Effective search space used: 460560
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no382_g07.g1 MSMg01no382_g07.g1 CHROMAT_FILE:
MSMg01no382_g07.g1 PHD_FILE: MSMg01no382_g07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:24:07 2005
(499 letters)
>mm_chr18_26502638_26503539
Length = 902
Score = 928 bits (480), Expect = 0.0
Identities = 496/502 (98%), Gaps = 3/502 (0%)
Strand = Plus / Minus
Query: 1 agtcctggtagtcccataaaagaaaacagagattaagaagaaaacctatgttgacatgaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 702 agtcctggtagtcccataaaagaaaacagagattaagaagaaaacctatgttgacatgaa 643
Query: 61 aactcagtctttctctatcaaatctctggtctcctatgtgttcctcttccaatggtgaga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 642 aactcagtctttctctatcaaatctctggtctcctatgtgttcctcttccaatggtgaga 583
Query: 121 tttagcaaataa--tgtg-tgaagggaactaagtggtcactaactcttatgtctgcttct 177
||| |||||||| |||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 582 tttggcaaataacgtgtgatgaagggaactaagtggtcactaactcttatgtctgcttct 523
Query: 178 aaggatactaaaaagacagaactggcataaagtaggcattgatggaaatggtctctgttt 237
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 522 aaggatactaaaaagacagaactggcataaagtaggcatcgatggaaatggtctctgttt 463
Query: 238 gttcatcctttatggtagaatttgatggcctctgttagtgatatgtaaatgtatttagta 297
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 462 gttcatcctttatggtagaatttgatggcctctgttagtgatatgtaaatgtatttagta 403
Query: 298 ttggaagcagttagttaccacctatagcagtgccatatatctaacaatcaggcttctgag 357
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 402 ttggaagcagttagttaccacctatagcagtgccatatatctaacaatcaggcttctgag 343
Query: 358 caacatatgtccagacaggtactttttactctacctagacattcccatgtactcattatt 417
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 342 caacatatgtccagacaggtattttttactctacctagacattcccatgtactcattatt 283
Query: 418 tgattttctcctttcttaagcttcagtgctcacaaggcaatttcactgatgtctaagatt 477
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 282 tgattttctcctttcttaagcttcagtgctcacaaggcaatttcactgatgtctaagatt 223
Query: 478 aggtgattttgcagtgtgacca 499
||||||||||||||||||||||
Sbjct: 222 aggtgattttgcagtgtgacca 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 499
Length of database: 902
Length adjustment: 10
Effective length of query: 489
Effective length of database: 892
Effective search space: 436188
Effective search space used: 436188
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
