CGCTATACGACTCACTATATTCAGAGGATCCGCGGAATTCTATAAAATCT
TTCTCAGGAATTATGAAATCATTAATTCATCTGCAACATCATTACTATAT
GAAAATACATATTCATATTGCTTCAGCAGGACATCTACCCAGTAGAGTAG
GCATATGCCCGGCAATCATTAGGCTATGCAATCGTGACAGGAAAGACATA
TCAGCAGCAAGAAGCAATCCTGGGATGAAGTCTCTTGAGGATCCTGCATC
TCAGAGAACAATGGGCCATCTCCAGAAACTGACTTGCTAAGCCTTTCTTA
GATGGCTTCTGATAGGAAATGGTTGTTTACTGCCATATTCTGGCCACTAA
TGCACTGGTGGGCATATCCTGCCAGGATGGTCATAATTGCAGCTTGAAAA
CCAAGCTTGATTGATTGCCTTTCTCCTCCACTAGCATGCATAACACCTAT
GGAAGTTATCCAATACAGACAAAGCTTCCAGGATAGTACAAGCTTGATTT
CCTCAATGGTCTATTTTAAATGGATTTTTTATTTTAGTTATTAATATGAC
CTAGCCAGCCCCCCCCCCCAGTAATCAAGGCAGAGTCCCATGGACTTATT
TAATCAGCTTAACACAATTACTGGNNGATAACTTTTAATCTATTTTTCTG
TACACTACACTGTCTACTTCCTAGCTGTACTCCCAAGTACCTGCTGGTTG
AGGCTTGCTCTCATTATTTCTGCTCCACAGGCCATCTTCTAGGAGGGGGA
GGGATTCAN

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXCAGGGCAGCACTCTTGCTCCAAACCTTTGGTGTACATTTGGTTTA
TACTCACTTAACGTTAAGGAAAGCTTAAAGTGCTTTCTTTGGGATTCCCC
ACAAGAGTTCAGGAGAGATTCCTGCAGATTAGAATTCTCTAACAGCCAGG
AAGAGATCTTGTGTGTGGAGAGAGGGCTGGGACCCAGTTCACTATGGGGG
CGGGGGCTGCTTTTGCTTTCCTTCTTTGCACTCTCTGGTTGTAGCATCTT
GATTACCAGTCCAAGTGTGATCCATGGAGGGATGCAGAGACAGTCTGTCT
TAACACAGCTGCCCAGCAAAGAGAAGCAAACAGAAAGCCTCTTTGGGAAG
ACATCTGTTGCTCCTTTGGACAGGCCTTGATTGTAGGCTTTTTTCCCCCT
ACTGGAGTAAGATACACACGTGTCATTAANATGTGCCAGTTTTATTTATT
TTCTTAGCATTCTGTTTATGTATCCTCTCTCCCTCTTCTGTTTAAAGTTT
GTTTTTAAGAAATTTGAGCATGTTTGGTCATCCTCCCCCCATCCCCCTTT
CGCCCGTGTTAAATGTTGGGCTCTGTAACATTTTAAGAATGCTTCCATCG
GGATTGGAACTGGTCAACCCCGCCATAGTCTCGAAAGGCTTTCCTTGGTT
TTTCACCGGGAAGTTTTGTTCCTCTTTTAAAATTAAATACCCCCTTTTTT
TTCCCCTGGGGGTCGGAA

Query= MSMg01no382_j09.g1 MSMg01no382_j09.g1 CHROMAT_FILE:
MSMg01no382_j09.g1 PHD_FILE: MSMg01no382_j09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:24:22 2005
         (425 letters)



>mm_chr18_57313714_57314539
          Length = 826

 Score =  791 bits (409), Expect = 0.0
 Identities = 421/425 (99%), Gaps = 1/425 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   cagggcagcactcttgctccaaacctttggtgtacatttggtttatactcacttaacgtt 60
           |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 201 cagggcagcactcttgctccaaacctttggtgtacatttggtttatcctcacttaacgtt 260

                                                                       
Query: 61  aaggaaagcttaaagtgctttctttgggattccccacaagagttcaggagagattcctgc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 261 aaggaaagcttaaagtgctttctttgggattccccacaagagttcaggagagactcctgc 320

                                                                       
Query: 121 agattagaattctctaacagccaggaagagatcttgtgtgtggagagagggctgggaccc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 agattagaattctctaacagccaggaagagatcttgtgtgtggagagagggctgggaccc 380

                                                                       
Query: 181 agttcactatggggg-cgggggctgcttttgctttccttctttgcactctctggttgtag 239
           ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 agttcactatggggggcgggggctgcttttgctttccttctttgcactctctggttgtag 440

                                                                       
Query: 240 catcttgattaccagtccaagtgtgatccatggagggatgcagagacagtctgtcttaac 299
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 catcttgattaccagtccaagtgtgatccatggagggatgcagagacagtctgtcttaac 500

                                                                       
Query: 300 acagctgcccagcaaagagaagcaaacagaaagcctctttgggaagacatctgttgctcc 359
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 acagctgcccagcaaagagaagcaaacagaaagcctctttgggaagacatctgttgctcc 560

                                                                       
Query: 360 tttggacaggccttgattgtaggcttttttccccctactggagtaagatacacacgtgtc 419
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 cttggacaggccttgattgtaggcttttttccccctactggagtaagatacacacgtgtc 620

                
Query: 420 attaa 424
           |||||
Sbjct: 621 attaa 625


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 425
Length of database: 826
Length adjustment: 9
Effective length of query: 416
Effective length of database: 817
Effective search space:   339872
Effective search space used:   339872
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)