Query= MSMg01no383_m14.b1 MSMg01no383_m14.b1 CHROMAT_FILE:
MSMg01no383_m14.b1 PHD_FILE: MSMg01no383_m14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:25:55 2005
(517 letters)
>mm_chr18_84643460_84644380
Length = 921
Score = 957 bits (495), Expect = 0.0
Identities = 510/517 (98%), Gaps = 4/517 (0%)
Strand = Plus / Minus
Query: 5 gaattctgtccatatatctacttatgtgtcacattatatttcttgatttgcatatgttga 64
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 867 gaattctgtccataaatctacttatgtgtcacattatatttcttgatttgcatatgttga 808
Query: 65 actatcctcacatctctggaagaaagccaacatgaccatgtcatatgatgttaagtgtgt 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 807 actatcctcacatctctggaagaaagccaacatgaccatgtcatatgatgttaagtgtgt 748
Query: 125 tttgtcttttgtcagttagtgtgttgcatacgtcatgttagttagcttattgcacacgtc 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 747 tttgtcttttgtcagttagtgtgttgcatacgtcatgttagttagcttattgcacacgtc 688
Query: 185 ttgttaattagcttgttctgtacatcttgattctcttgcctagcagtcagcgtatggttc 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 687 ttgttaattagcttgttctgtacatcttgattctcttgcctagcagtcagcgtatggttc 628
Query: 245 ctctttctgcatagtgctctttcttttctctatcaaattctgttttggtctttgttattg 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 627 ctctttctgcatagtgctctttcttttctctatcaaattctgttttggtctttgttattg 568
Query: 305 cttctatcgagcgacttttggtatgcacctacccaagtatcttcagggtgcattgttctg 364
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 567 cttctatcgagcaacttttggtatgcacctacccaagtatcttcagggtgcattgttctg 508
Query: 365 ttgtttgaaagatcatagtcattcattctttgcctccacccctct----ctccctccctc 420
||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 507 ttgtttgaaagatcatagtcattcattctttgcctccacccctctctccctccctccctc 448
Query: 421 cctctgtaatatggctttgtcatccagtcttccttgaactgtatatcccagtggttcctg 480
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 447 cctctgtaatatggctttgtcatccagccttccttgaactgtatatcccagtggttcctg 388
Query: 481 taaattcttaattgtttttatttaattctagaattaa 517
|||||||||||||||||||||||||||||||||||||
Sbjct: 387 taaattcttaattgtttttatttaattctagaattaa 351
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 517
Length of database: 921
Length adjustment: 10
Effective length of query: 507
Effective length of database: 911
Effective search space: 461877
Effective search space used: 461877
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no383_m14.g1 MSMg01no383_m14.g1 CHROMAT_FILE:
MSMg01no383_m14.g1 PHD_FILE: MSMg01no383_m14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:25:55 2005
(451 letters)
>mm_chr18_84473650_84474505
Length = 856
Score = 804 bits (416), Expect = 0.0
Identities = 444/456 (97%), Gaps = 5/456 (1%)
Strand = Plus / Plus
Query: 1 ccctgtgagaggcctgtgactgatagcataggaggcatggtgatcgtcacgccagcgtca 60
||||||||||||||||||||||||||||||||||||||||||||| | |||||||| |||
Sbjct: 201 ccctgtgagaggcctgtgactgatagcataggaggcatggtgatctttacgccagcatca 260
Query: 61 ctgtatttaataaggcagtagcacagttgtggtcatgctgacactgagggctggctgcag 120
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 261 ctgtatttaataaggcagtagcacagttgtggtcatgctgacactgaaggctggctgcag 320
Query: 121 actgaacgacttgtcttcaggtagtcagctcctttgtgaagattgagctaattacaaatg 180
||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 321 actgaacgactcgtcttcaggtagtcagctcctttgcgaagattgagctaattacaaatg 380
Query: 181 cctgcatcactcagttgtcacacacgatttggtcatttattgagaacaatctgcagttag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cctgcatcactcagttgtcacacacgatttggtcatttattgagaacaatctgcagttag 440
Query: 241 ttcaagatcacagaaacccttcccttgtgttctttccacacagataacactgctagtgtc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ttcaagatcacagaaacccttcccttgtgttctttccacacagataacactgctagtgtc 500
Query: 301 tctgagaaacatgttcggctttgtccttacacat-----aagcaattggacatctatttg 355
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 501 tctgagaaacatgttcggctttgtccttacacatcttataagcaattggacatctatttg 560
Query: 356 tatagttgctctattaatgcctatgtctgccaaggcaacacacccccttacttgctcaca 415
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 561 tatagttgctctattaatgcctatgtctgccaaggcaacacacccccttacttgctccca 620
Query: 416 ctggcgccgggtgtggtatggaaggggatgctatag 451
||||||||||||||||||||||||||||||||||||
Sbjct: 621 ctggcgccgggtgtggtatggaaggggatgctatag 656
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 451
Length of database: 856
Length adjustment: 10
Effective length of query: 441
Effective length of database: 846
Effective search space: 373086
Effective search space used: 373086
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
