Query= MSMg01no391_h17.b1 MSMg01no391_h17.b1 CHROMAT_FILE:
MSMg01no391_h17.b1 PHD_FILE: MSMg01no391_h17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:35:43 2005
(431 letters)
>mm_chr18_89932402_89933232
Length = 831
Score = 810 bits (419), Expect = 0.0
Identities = 428/431 (99%)
Strand = Plus / Minus
Query: 1 atttctctttctttaattaaaaccttgagacacatattcctggcttaattactcttgttt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 631 atttctctttctttaattaaaaccttgagacacatattcctggcttaattactcttgttt 572
Query: 61 tacattctctgaacatgaggctctctctctattataaagttttcctctgataagagatgg 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 571 tacattctctgaacatgaggctctctctctattataaagttttcctctgataagagatag 512
Query: 121 aagagtatagttgtttcataagagacaggtgtgaaggcttgtgctcttatagacacttac 180
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 511 aagagtatagttgtttcataagagacaggtgtgaaggcttgcgctcttatagacacttac 452
Query: 181 tcatcaatcaaacaggaaaacatatgagtcagagttttgtttattagagaaagtaatatt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 451 tcatcaatcaaacaggaaaacatatgagtcagagttttgtttattagagaaagtaatatt 392
Query: 241 tagtaaatctctcttttgaatcactaaaactgccttttaaagtgaggtggtatactttat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 391 tagtaaatctctcttttgaatcactaaaactgccttttaaagtgaggtggtatactttat 332
Query: 301 aacatactttagcaatgcactaagaattaaaagaaacagataaatttaagacataatcta 360
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 331 aacatactttagcaatgtactaagaattaaaagaaacagataaatttaagacataatcta 272
Query: 361 cagaaaatgaccttgactatcagaaacttaaaaagaatgaacattcaaaaatataattac 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 271 cagaaaatgaccttgactatcagaaacttaaaaagaatgaacattcaaaaatataattac 212
Query: 421 agatgtgaata 431
|||||||||||
Sbjct: 211 agatgtgaata 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 431
Length of database: 831
Length adjustment: 9
Effective length of query: 422
Effective length of database: 822
Effective search space: 346884
Effective search space used: 346884
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no391_h17.g1 MSMg01no391_h17.g1 CHROMAT_FILE:
MSMg01no391_h17.g1 PHD_FILE: MSMg01no391_h17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:35:43 2005
(247 letters)
>mm_chr18_89808443_89809089
Length = 647
Score = 426 bits (220), Expect = e-124
Identities = 237/246 (96%), Gaps = 6/246 (2%)
Strand = Plus / Plus
Query: 1 caatgttgtttttgaagattcatttcagttgttattaatttccaagacagttcatgttta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 207 caatgttgtttttgaagattcatttcagttgttattaatttccaagacagttcatgttta 266
Query: 61 gaaggatgtgcctgctgaaataccgagacagagagagagagagagagagagagagagaga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 gaaggatgtgcctgctgaaataccgagacagagagagagagagagagagagagagagaga 326
Query: 121 gagagagagagagagagaacttgatgtatgtgtgaccagattaatatccagtatatattt 180
|||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 gagagagagaga------acttgatgtatgtgtgaccagattaatatccagtatatataa 380
Query: 181 tatcatcaacgaaacatctaagagttaacaatataatttgccaaataaaaatcttttatg 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aatcatcaacgaaacatctaagagttaacaatataatttgccaaataaaaatcttttatg 440
Query: 241 gagctg 246
||||||
Sbjct: 441 gagctg 446
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 19
Number of successful extensions: 19
Number of sequences better than 10.0: 1
Number of HSP's gapped: 11
Number of HSP's successfully gapped: 1
Length of query: 247
Length of database: 647
Length adjustment: 9
Effective length of query: 238
Effective length of database: 638
Effective search space: 151844
Effective search space used: 151844
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
