Query= MSMg01no391_k24.b1 MSMg01no391_k24.b1 CHROMAT_FILE:
MSMg01no391_k24.b1 PHD_FILE: MSMg01no391_k24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:35:59 2005
(352 letters)
>mm_chr18_76118838_76119589
Length = 752
Score = 671 bits (347), Expect = 0.0
Identities = 350/351 (99%)
Strand = Plus / Minus
Query: 2 aatggaattcataactcaaatgctaataggattatgaagaaattggaacacttataaatg 61
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 752 aatggaattcataactcaaatgctaataggattatgaagaaattggaacacttataaatg 693
Query: 62 gtgaatggcattaaaatctagtacaatatatggagaaaatatttagcaaacatatcaaga 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 692 gtgaatggcattaaaatctagtacaatatatggagaaaatatttagcaaacatatcaaga 633
Query: 122 cccatatagacacgtgcaccctataacctaataatcccactgctgaaattttaccccaaa 181
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 632 cccatatagacacgtgcgccctataacctaataatcccactgctgaaattttaccccaaa 573
Query: 182 agaacaaacagaaatgtgcagccctgccttgctgagtcagcactgctgaggccgatagtt 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 572 agaacaaacagaaatgtgcagccctgccttgctgagtcagcactgctgaggccgatagtt 513
Query: 242 gctaataccttcgtgcgtggatgacatctctatagtcaattaatgagccaatcttcatac 301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 512 gctaataccttcgtgcgtggatgacatctctatagtcaattaatgagccaatcttcatac 453
Query: 302 gatataacattagccagcccggtcagcattggtcacagtcagaactgagct 352
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 452 gatataacattagccagcccggtcagcattggtcacagtcagaactgagct 402
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 352
Length of database: 752
Length adjustment: 9
Effective length of query: 343
Effective length of database: 743
Effective search space: 254849
Effective search space used: 254849
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no391_k24.g1 MSMg01no391_k24.g1 CHROMAT_FILE:
MSMg01no391_k24.g1 PHD_FILE: MSMg01no391_k24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:35:59 2005
(316 letters)
>mm_chr18_75932479_75933194
Length = 716
Score = 549 bits (284), Expect = e-161
Identities = 308/320 (96%), Gaps = 8/320 (2%)
Strand = Plus / Plus
Query: 1 acagcctagtgtgaatttcttgttaaatggatcaatgtgtcatcttccgactctccagtt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 acagcctagtgtgaatttcttgttaaatggatcaatgtgtcatcttccgactctccagtt 260
Query: 61 gtcatttaccctcctgttttttagagacaatgtgtttggacttattatttcatagccagt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gtcatttaccctcctgttttttagagacaatgtgtttggacttattatttcatagccagt 320
Query: 121 ggatcatcatgtgtcttagttagggtttctcttgctgtgatgaaacttcagaaccaaacc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ggatcatcatgtgtcttagttagggtttctcttgctgtgatgaaacttcagaaccaaacc 380
Query: 181 aacttggggagcaaagggtttgtttggcttaaactttcatattactgttcatcattgaag 240
|||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 381 aacttggggagcaaagcgtttgtttgtcttaaactttcatattactgttcatcattgaag 440
Query: 241 ggagtcaggatttt----atcttggaggcaggagctgatgcagaggccatggagggtgct 296
|||||||||| |||||||||||||||||||||||||||| |||||||||||||
Sbjct: 441 ggagtcagga----caggatcttggaggcaggagctgatgcagaggtcatggagggtgct 496
Query: 297 gctgattggtggattacagt 316
||||| ||||||||||||||
Sbjct: 497 gctgactggtggattacagt 516
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 316
Length of database: 716
Length adjustment: 9
Effective length of query: 307
Effective length of database: 707
Effective search space: 217049
Effective search space used: 217049
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
