Query= MSMg01no393_g08.b1 MSMg01no393_g08.b1 CHROMAT_FILE:
MSMg01no393_g08.b1 PHD_FILE: MSMg01no393_g08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:38:19 2005
(516 letters)
>mm_chr18_64338108_64339023
Length = 916
Score = 951 bits (492), Expect = 0.0
Identities = 507/512 (99%)
Strand = Plus / Plus
Query: 5 gaattcacccttgttccattagacttcatttacaaaacacaaactcaaagacaagatgat 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcacccttgttccattagacttcatttacaaaacacaaactcaaagacaagatgat 264
Query: 65 tcaggattccaaggaacaggattctatatttgccctaggtgctgtgaagataaaaatcaa 124
|||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 265 tcaggattccaacgaacaggattctatatttgccctgggtgctgtgaagataaaaatcaa 324
Query: 125 gtttagggtgtggtcaccagccctggtgagggttattaagtggctgataagaatgacgaa 184
|||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 325 gtttagggtgtgatcaccagccctggtgagagttattaagtggctgataagaatgacgaa 384
Query: 185 tttccagcgacaaggtcttagaagccaataccaggcctacagagtaagaatccaggaagt 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 tttccagcgacaaggtcttagaagccaataccaggcctacagagtaagaatccaggaagt 444
Query: 245 agagaggaaagactacaaagactggtggctaagggctgggcagagccagaacacagagct 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 agagaggaaagactacaaagactggtggctaagggctgggcagagccagaacacagagct 504
Query: 305 gagcatctcacctgttggaggctccttcaccttactttttctaaagggggtaaaaaaaag 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 gagcatctcacctgttggaggctccttcaccttactttttctaaagggggtaaaaaaaag 564
Query: 365 gaaagagacatctgatggaaggtgagggaagatggtcgggacaatggcaagacatgatca 424
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 565 gaaagagacatctgatggaaggtgagggaagatggccgggacaatggcaagacatgatca 624
Query: 425 gtcatttggagaaaataaagcttgttgtctctgagttcaaattagccgcttgaatgcagt 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 gtcatttggagaaaataaagcttgttgtctctgagttcaaattagccgcttgaatgcagt 684
Query: 485 cacaatgctttagagcccggtgcttggaagta 516
||||||||||||||||||||||||||||||||
Sbjct: 685 cacaatgctttagagcccggtgcttggaagta 716
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 516
Length of database: 916
Length adjustment: 10
Effective length of query: 506
Effective length of database: 906
Effective search space: 458436
Effective search space used: 458436
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no393_g08.g1 MSMg01no393_g08.g1 CHROMAT_FILE:
MSMg01no393_g08.g1 PHD_FILE: MSMg01no393_g08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:38:19 2005
(456 letters)
>mm_chr18_64493626_64494482
Length = 857
Score = 876 bits (453), Expect = 0.0
Identities = 456/457 (99%), Gaps = 1/457 (0%)
Strand = Plus / Minus
Query: 1 ccccaaccataccttacggactccaagttccccaatccaactgctctgactttcagttcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 657 ccccaaccataccttacggactccaagttccccaatccaactgctctgactttcagttcc 598
Query: 61 cttctcaggattacctgtcaccttggcctcaaagtcagtttggggttggtaagtgacttc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 597 cttctcaggattacctgtcaccttggcctcaaagtcagtttggggttggtaagtgacttc 538
Query: 121 cgttgcaccttcacattaaagagggtttccagatgtactacttaagtgggttgaagataa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 537 cgttgcaccttcacattaaagagggtttccagatgtactacttaagtgggttgaagataa 478
Query: 181 agttttcctttttttgtcagttgtcaccttacaaaaggagattgggcgtgaggtcccttt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 477 agttttcctttttttgtcagttgtcaccttacaaaaggagattgggcgtgaggtcccttt 418
Query: 241 gtcccggtcaagttgcccgtgaaatctttttgttgtcttttctaaagaaaggcgaaagtt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 417 gtcccggtcaagttgcccgtgaaatctttttgttgtcttttctaaagaaaggcgaaagtt 358
Query: 301 gcagttggttataaaaagaacaaatttagctccttgaaaatgaaacagtttttaagttgc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 357 gcagttggttataaaaagaacaaatttagctccttgaaaatgaaacagtttttaagttgc 298
Query: 361 cgggagacaccaagtacggcagcactgttttatttattgtcctct-aaaaaacatcattt 419
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 297 cgggagacaccaagtacggcagcactgttttatttattgtcctctaaaaaaacatcattt 238
Query: 420 atttgctcttcaaataacatgtttggagggcttagca 456
|||||||||||||||||||||||||||||||||||||
Sbjct: 237 atttgctcttcaaataacatgtttggagggcttagca 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 456
Length of database: 857
Length adjustment: 10
Effective length of query: 446
Effective length of database: 847
Effective search space: 377762
Effective search space used: 377762
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
