Query= MSMg01no396_d18.b1 MSMg01no396_d18.b1 CHROMAT_FILE:
MSMg01no396_d18.b1 PHD_FILE: MSMg01no396_d18.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:08:19 2005
(511 letters)
>mm_chr18_8717045_8717955
Length = 911
Score = 949 bits (491), Expect = 0.0
Identities = 503/507 (99%)
Strand = Plus / Minus
Query: 5 gaattccccaatgttgcgacatgtacagatagctgtgttcatgtccacctagagttcttt 64
|||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 711 gaattccccaatgtggggacatgtacagatagctgtgttcatgtccacctagagttcttt 652
Query: 65 ttctccagaatgtgggacctagtttgacttcctttttcctttaatgattctcagctgcca 124
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 651 ttctccagaatgtgggacctagtttgacttcctttctcctttaatgattctcagctgcca 592
Query: 125 tgagtgtcttcaaaatcatttttctatggagatgtgagacacagagaagcagatttgttg 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 591 tgagtgtcttcaaaatcatttttctatggagatgtgagacacagagaagcagatttgttg 532
Query: 185 ctggtctgaagactatgtttttctttgagtgtcttttgatattttttgtttcttgtcctt 244
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 531 ctggtctgaagactatgtttttccttgagtgtcttttgatattttttgtttcttgtcctt 472
Query: 245 agtcttgtgatcctgttttaccctcatctttgtgagtgtcaagttttcatcagatctgta 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 471 agtcttgtgatcctgttttaccctcatctttgtgagtgtcaagttttcatcagatctgta 412
Query: 305 tcttgatataatttttttggatcagttttgaaaaaataatgataactttgcattttcttt 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 411 tcttgatataatttttttggatcagttttgaaaaaataatgataactttgcattttcttt 352
Query: 365 gctttgtttcttctccaattctgatactacataaatgttattgtatatatagcacacact 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 351 gctttgtttcttctccaattctgatactacataaatgttattgtatatatagcacacact 292
Query: 425 catgtatgagatgaagagaaggcctaacacacataaaactaaatgtacagacaagtggat 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 291 catgtatgagatgaagagaaggcctaacacacataaaactaaatgtacagacaagtggat 232
Query: 485 tttaaacaaatgatgcacatcttttca 511
|||||||||||||||||||||||||||
Sbjct: 231 tttaaacaaatgatgcacatcttttca 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 511
Length of database: 911
Length adjustment: 10
Effective length of query: 501
Effective length of database: 901
Effective search space: 451401
Effective search space used: 451401
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no396_d18.g1 MSMg01no396_d18.g1 CHROMAT_FILE:
MSMg01no396_d18.g1 PHD_FILE: MSMg01no396_d18.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:08:19 2005
(447 letters)
>mm_chr18_8569049_8569895
Length = 847
Score = 810 bits (419), Expect = 0.0
Identities = 440/447 (98%)
Strand = Plus / Plus
Query: 1 cagtatctaagggagaggctgaggacctccaagagctcctagagtagccttataggaaac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cagtatctaagggagaggctgaggacctccaagagctcctagagtagccttataggaaac 260
Query: 61 ctgctttgaagtggggtaggatgtgggcacaaggggaaacagcaaccattggaacctcac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ctgctttgaagtggggtaggatgtgggcacaaggggaaacagcaaccattggaacctcac 320
Query: 121 tgtaaaacttaactatgcaaatatttctggttctggttgtattagaaaagaatctagagc 180
||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgtaaaacttaacaaagcaaatatttctggttctggttgtattagaaaagaatctagagc 380
Query: 181 atcacatgagctagctgagtgcccactgactgaaccactcctgacaggtgtgcaaacctc 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 381 atcacatgagctagctgagtgcccactgactgaaccactcctgacaggtgtgcaaatctc 440
Query: 241 tcttgaacttacactacacctgagcaagtcttaaacctataattttcctgcctcatcctc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 441 tcttgaacttacactacacctgagcaagtcttaaacctataattttcctgcctcatcgtc 500
Query: 301 cccagtagttgggattacaggactgccaccatgcccagcagacaaaataattgcaaattc 360
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 cccagtagttgggatcacaggactgccaccatgcccagcagacaaaataattgcaaattc 560
Query: 361 tttcatttatgaaaaattaaggtgttaggtataagaatacaggtactaacatgtatttaa 420
||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 561 tttcatttatgaaaaattaaggtaataggtataagaatacaggtactaacatgtatttaa 620
Query: 421 agaaataagtctttacttaatattggt 447
|||||||||||||||||||||||||||
Sbjct: 621 agaaataagtctttacttaatattggt 647
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 447
Length of database: 847
Length adjustment: 10
Effective length of query: 437
Effective length of database: 837
Effective search space: 365769
Effective search space used: 365769
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
