XXXXXXXXXXXXXXXXXXXXXXXXTTCAGAACACCGCGGAATTCTTGGAA
TTTTCCTTTATTTTTACCTAAATGGAAACACACACACAAAGGACACACAA
GAGAACTGACTACAGTTCAAATGTTTTTTTGGTGGGGTCACTCAGTGGTT
ACTGCTGACCTCAGAAAACTTCAAAATGCCTGGTTTTCTGGAAACAGAAT
CAAAACAGCAGCTGTCTGTATATTTTGGGTTGGTACTCCAATGGAGAGAC
TGCTTTCCGTGGGAGTGAAGGCAAAGAGGGTGCTGCGAATCCAAAGGAGC
AACAACTCACTGTTTACAGAGATTTCCTTGCCAGCAACAAATTATTAACT
GAAATTAAACTAAAAAACAGGGAAAACAATGATAACAACAGATTATTTTA
TTATCATATAAATTTGTCTACAAAATAGGATGCCTTTGTTGAAGACAGGG
TGTGAAATAAGGCCCCCGATTACAAAGAGCGGGCAAGAGCATGGAATGAA
AACATCACAAGAACCTACTTGCTGGATACCTTAAATTTTGTTGCGTGTGA
TATGCATGCTTGCAAGCATGTGTGCCTTCTATGTATGGAAGCTTAGAAGC
CCAAGCGAGTGCCTTTAAAAATTGCCCTCAAATTTGTTCTTTCAAAAAAG
GGTCTTTTTCCTTACCCTTGACATCACCCTTGTCCATTTCCGGTTTTGTT
CGCCATTTTATCTCCCACCCGGCATTTGTCCCTCCTAAAATATTACCTCT
CCCCCTTATTAAATGACTCCTCTCN

GGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXACATCCCTTTTGCTGTTTCTGTGGTTGATGCTATCCCAC
TTTAATCCATTGGGCTCAGAGAGGATGCAGGATGCTTTTTTTTGTCCCCC
CCCCAGATTGGTTGAGACTCGCTTGTTGTCCTAACACACAATCAATTTTG
GAGAAAGTTCCATCACCTCCTGAGGAGAAATGTGCTCATTAATGTTTGGT
GTAGGGCGTTCTGTACTTGGCTGCAAGGTCCATTTGATTCATGACATTAA
CTCCAGAATCTCTGGGCTTAGTTATCGTCTGATGACCTGTCTATTAAAGG
AATATAGTTCCTGAAGTTATCCAGTGTTACTGTGTTCAGGTCAATATGTG
ATTTTGGCATTAACGGTGTTTCTTTTATCAACTTGGCTTCCCTTGATTTG
GGGGGCATAAACTTTTAAAATTATATCTCCCTGGTGTATTTTGCTTTTAA
AGAGTATGTAGCATAATTCACTATCTCTTCCCAATATTTTTGGTCTGAAG
TCCTGTCTTTTTTTTAAAAATTAATATTAACTATGCCCTATTGTTTTTAT
TGGCCCTATTTCCCCCTTTTTTTGTTTCTTTTTTATATCGATTGCCTGCC
CTCTTTCCCTGACATTCCTTTTCCCTCCCTTCCCTATACCCCCTTGTTCC
CTCTTTACTTTTCCCCTTATTCCTCCTACTTTTTCTCCCTTTTCTCTTCC
CCTCTTTCTTTTTCTTC

Query= MSMg01no396_l08.b1 MSMg01no396_l08.b1 CHROMAT_FILE:
MSMg01no396_l08.b1 PHD_FILE: MSMg01no396_l08.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:08:54 2005
         (447 letters)



>mm_chr18_83758948_83759795
          Length = 848

 Score =  756 bits (391), Expect = 0.0
 Identities = 434/449 (96%), Gaps = 5/449 (1%)
 Strand = Plus / Plus

                                                                       
Query: 2   ggaattcttggaatt-t-tcctttatttttacctaaa-tggaaacacacacacaaaggac 58
           ||||||||||||||| | |  |||||||||||||||| | ||||||||||||||||||||
Sbjct: 202 ggaattcttggaattctat--tttatttttacctaaagtagaaacacacacacaaaggac 259

                                                                       
Query: 59  acacaagagaactgactacagttcaaatgtttttttggtggggtcactcagtggttactg 118
           |||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||
Sbjct: 260 acacaagagaactgactaaagttcaaatgtttttttggtggggtcactcagtggctactg 319

                                                                       
Query: 119 ctgacctcagaaaacttcaaaatgcctggttttctggaaacagaatcaaaacagcagctg 178
           ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 320 ctgacctcagaaaacttcaaaatacctggttttctggaaacagaatcaaaacagcagctg 379

                                                                       
Query: 179 tctgtatattttgggttggtactccaatggagagactgctttccgtgggagtgaaggcaa 238
           |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |
Sbjct: 380 tctgtatattttgggttggtactccaatggagagactgctttccatgggagtgaaggcta 439

                                                                       
Query: 239 agagggtgctgcgaatccaaaggagcaacaactcactgtttacagagatttccttgccag 298
           ||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||
Sbjct: 440 agagggtgctgcgaatccaaaggagcaacaactcactggatacagagatttccttgccag 499

                                                                       
Query: 299 caacaaattattaactgaaattaaactaaaaaacagggaaaacaatgataacaacagatt 358
           ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 500 caacaaattattaactgaaatgaaactaaaaaacagggaaaacaatgataacaacagatt 559

                                                                       
Query: 359 attttattatcatataaatttgtctacaaaataggatgcctttgttgaagacagggtgtg 418
           |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 560 attttattatcatataaatttgtctacaaaataggatgcctttgttgaaggcagggtgtg 619

                                        
Query: 419 aaataaggcccccgattacaaagagcggg 447
           |||||||||||||||||||||||||||||
Sbjct: 620 aaataaggcccccgattacaaagagcggg 648


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 447
Length of database: 848
Length adjustment: 10
Effective length of query: 437
Effective length of database: 838
Effective search space:   366206
Effective search space used:   366206
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)