Query= MSMg01no404_f17.b1 MSMg01no404_f17.b1 CHROMAT_FILE:
MSMg01no404_f17.b1 PHD_FILE: MSMg01no404_f17.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:19:00 2005
(301 letters)
>mm_chr18_57967317_57968014
Length = 698
Score = 522 bits (270), Expect = e-153
Identities = 290/298 (97%), Gaps = 3/298 (1%)
Strand = Plus / Plus
Query: 1 ctactggttaagtctgagtctcaaaaacaaaaagcaagcaaacaaacaaaaaaaaaatac 60
|||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||
Sbjct: 201 ctactggttaagtctgtgtctcaaaaacaaaaagcaagcaaacaaacaaaaaaa---tac 257
Query: 61 catgcccccaaagaacaacatgtaaaacatagattttcctcagatactttcacagagttt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 258 catgcccccaaagaacaacatgtaaaacatagattttcctcagatactttcacagaggtt 317
Query: 121 ttttcatatagttttttaaaaatgattcttacagagcaaacaatgcacatattcaaatta 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 318 ttttcatatagttttttaaaaatgattcttacagagcaaacaatgcacatattcaagtta 377
Query: 181 tgcttgtagtgggggatgccaaaaatctgaatggaacctaccagccagtcctggaagaat 240
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 378 tgcttgtagtgggggatgccaaaaatctgaatggaacctactagccagtcctggaagaat 437
Query: 241 cagtgattatgaaatttattcccagtagggaatatagtgggtttgtttgtttgtttgt 298
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 438 cagtgattatgaaatttattcccagtagggaatatagtgggattgtttgtttgtttgt 495
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 301
Length of database: 698
Length adjustment: 9
Effective length of query: 292
Effective length of database: 689
Effective search space: 201188
Effective search space used: 201188
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no404_f17.g1 MSMg01no404_f17.g1 CHROMAT_FILE:
MSMg01no404_f17.g1 PHD_FILE: MSMg01no404_f17.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:19:00 2005
(414 letters)
>mm_chr18_58188368_58189181
Length = 814
Score = 739 bits (382), Expect = 0.0
Identities = 397/402 (98%)
Strand = Plus / Minus
Query: 1 agtaaaagaacatttcaaaaccatttaaaggatgctaccagaagagtggagagaaagtgg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 581 agtaaaagaacatttcaaaaccatttaaaggatgctaccagaagagtggagagaaagtgg 522
Query: 61 tagtagccaaacctgagttggagacacgaggaaaggacaggaaattagattggcttgaca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 521 tagtagccaaacctgagttggagacacgaggaaaggacaggaaattagattggcttgaca 462
Query: 121 gatgttaagagaagggggaacatcaccctaaacgtgaaacgtatgaagtggcaggtaagc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 461 gatgttaagagaagggggaacatcaccctaaacgtgaaacgtatgaagtggcaggtaagc 402
Query: 181 ttggaatagcaagcgtgcgctggatcacagatacacacactttcaaagttcttttgagga 240
|||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 401 ttggaatagcaatcgtgcactggatcacagatacacacactttcaaagttcttttgagga 342
Query: 241 ccagctggatgcttctgtaagaaacacaccaagacaaaagggtgagaggatggtgtgaaa 300
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 341 ccagctggatgcttctgtaagaaacacaccaagacaaaggggtgagaggatggtgtgaaa 282
Query: 301 taaagagatggggaaagacagtccaggcatctgttagtaaaaagacaacacaaaaggatg 360
|||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 281 taaagagatgaggaaagacagtccaggcatctgttagtaaaaagacaacgcaaaaggatg 222
Query: 361 tcagaacactgaagactaaacaaggaaggaaggaaggaagga 402
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 221 tcagaacactgaagactaaacaaggaaggaaggaaggaagga 180
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 55
Number of extensions: 20
Number of successful extensions: 8
Number of sequences better than 10.0: 1
Number of HSP's gapped: 8
Number of HSP's successfully gapped: 1
Length of query: 414
Length of database: 814
Length adjustment: 9
Effective length of query: 405
Effective length of database: 805
Effective search space: 326025
Effective search space used: 326025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
