Query= MSMg01no405_i06.b1 MSMg01no405_i06.b1 CHROMAT_FILE:
MSMg01no405_i06.b1 PHD_FILE: MSMg01no405_i06.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:20:31 2005
(273 letters)
>mm_chr18_14629085_14629757
Length = 673
Score = 489 bits (253), Expect = e-143
Identities = 264/269 (98%), Gaps = 4/269 (1%)
Strand = Plus / Plus
Query: 7 aattctttgac--tttcccacacttgatttcattgagttttggacattcgcacatctatt 64
||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 207 aattctttgacaatttc--acacttgatttcattgagttttggacattcgcacatctatt 264
Query: 65 gccctctcttattctccaatcttgcctgtcaaaacatttccccccaaacctctcagttat 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 gccctctcttattctccaatcttgcctgtcaaaacatttccccccaaacctctcagttat 324
Query: 125 gtcatttcccatatacatctttacagaggggaggactcttatgagcctctccttcctgca 184
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 325 gtcatttcccatatacatctttacagaggggaggactcttatgagcccctccttcctgca 384
Query: 185 ttatgaagtgatggtaggcccagtcctatgctagtcttggacaattaaccactactacta 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 ttatgaagtgatggtaggcccagtcctatgctagtcttggacaattaaccactactacta 444
Query: 245 tgtattcatgatcacaaaaggtcctggca 273
|||||||||||||||||||||||||||||
Sbjct: 445 tgtattcatgatcacaaaaggtcctggca 473
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 273
Length of database: 673
Length adjustment: 9
Effective length of query: 264
Effective length of database: 664
Effective search space: 175296
Effective search space used: 175296
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no405_i06.g1 MSMg01no405_i06.g1 CHROMAT_FILE:
MSMg01no405_i06.g1 PHD_FILE: MSMg01no405_i06.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:20:31 2005
(330 letters)
>mm_chr18_14782683_14783412
Length = 730
Score = 605 bits (313), Expect = e-177
Identities = 325/329 (98%)
Strand = Plus / Minus
Query: 1 ttttgctctgagattctgtattttcagtaataatattcagttcaacatcatcttacaggc 60
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 529 ttttgctctgagattctgtattttcagtaataatattcagttcagcatcatcttacaggc 470
Query: 61 gttacattcagactgctgccttttctctcacgttaaacaaaagattaacaagtaaattac 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 469 tttacattcagactgctgccttttctctcacgttaaacaaaagattaacaagtaaattac 410
Query: 121 ataaaagtgataaacattttatataactgtcatataaaaggtgatgattattgaagatct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 409 ataaaagtgataaacattttatataactgtcatataaaaggtgatgattattgaagatct 350
Query: 181 gtaaaagtgactgtcccatgcataatggcatatactgagaatatatattctcgtttccct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 349 gtaaaagtgactgtcccatgcataatggcatatactgagaatatatattctcgtttccct 290
Query: 241 tctgatgatagacttatgcttccctgttttgtgacttcttttccgagtcgccactctatt 300
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 289 tctgatgagagacttatgcttccctgttttgtgacttcttttccgagtcgccactctatt 230
Query: 301 ctttcactgttaaagaaacagttttctta 329
||| |||||||||||||||||||||||||
Sbjct: 229 cttgcactgttaaagaaacagttttctta 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 330
Length of database: 730
Length adjustment: 9
Effective length of query: 321
Effective length of database: 721
Effective search space: 231441
Effective search space used: 231441
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
