Query= MSMg01no408_m17.b1 MSMg01no408_m17.b1 CHROMAT_FILE:
MSMg01no408_m17.b1 PHD_FILE: MSMg01no408_m17.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:24:53 2005
(456 letters)
>mm_chr18_85322660_85323515
Length = 856
Score = 835 bits (432), Expect = 0.0
Identities = 447/452 (98%)
Strand = Plus / Minus
Query: 5 gaattcctgaggctgccgagtgggggtcttggctagcatgccacatggagttactggaga 64
||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 656 gaattcctgaggctggtgagtgggggtcttggctagcatgccacatggagttactggaga 597
Query: 65 agaggccagatagtgtgagcccacacagcctcactagattccagctttaagaggacccct 124
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 596 agaggccagatagtgtgagcccacacagcctcactagattcccgctttaagaggacccct 537
Query: 125 ctcctcccctactttactgctttaaagaaaaaaatattgtcttagcactaaaatagctca 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 536 ctcctcccctactttactgctttaaagaaaaaaatattgtcttagcactaaaatagctca 477
Query: 185 cttgtcttagcacccccataataactgacaggtgctatataaataaaatacacagaaatt 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 476 cttgtcttagcacccccataataactgacaggtgctatataaataaaatacacagaaatt 417
Query: 245 atttgtagctagattgaaattattcaaaagtcatcagattgaaagtaagtgcatctcagg 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 416 atttgtagctagattgaaattattcaaaagtcatcagattgaaagtaagtgcatctcagg 357
Query: 305 ataaggagcctagctgtgaatcccagtccacaagtcagtgtcccatgaaggctgactatg 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 356 ataaggagcctagctgtgaatcccagtccacaagtcagtgtcccatgaaggctgactatg 297
Query: 365 aagctcgcccgacagtctcccaggcttcctcaatagcagtcagtggcctaaacaatcaca 424
|||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 296 aagcccacccgacagtctcccaggcttcctcaatagcagtcagtggcctaaacaatcaca 237
Query: 425 ggtcacctcccttgtgcctcacaacacactgt 456
||||||||||||||||||||||||||||||||
Sbjct: 236 ggtcacctcccttgtgcctcacaacacactgt 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 456
Length of database: 856
Length adjustment: 10
Effective length of query: 446
Effective length of database: 846
Effective search space: 377316
Effective search space used: 377316
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no408_m17.g1 MSMg01no408_m17.g1 CHROMAT_FILE:
MSMg01no408_m17.g1 PHD_FILE: MSMg01no408_m17.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:24:53 2005
(404 letters)
>mm_chr18_85095441_85096245
Length = 805
Score = 752 bits (389), Expect = 0.0
Identities = 401/405 (99%), Gaps = 1/405 (0%)
Strand = Plus / Plus
Query: 1 atagttcccattaaggggtgatgtggtaggcagtgctgaaggaacagcacgtggaagaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 atagttcccattaaggggtgatgtggtaggcagtgctgaaggaacagcacgtggaagaaa 260
Query: 61 tatctattggtgggtgtggaagaaaagaagatctggcaatgaccttggacttggagagac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tatctattggtgggtgtggaagaaaagaagatctggcaatgaccttggacttggagagac 320
Query: 121 agggccatgcatgtggaacgacttcaaggccagctgtggcaagcatggtgcaaccccatg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 agggccatgcatgtggaacgacttcaaggccagctgtggcaagcatggtgcaaccccatg 380
Query: 181 gtagacacagaatgatttccagtgaaaagagagacacaca-gggaggaggagctatgaag 239
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 381 gtagacacagaatgatttccagtgaaaagagagacacacaagggaggaggagctatgaag 440
Query: 240 aaggaggtgtgcttgtatgtgcagaggccaggactgcgcagagctctgcagtgtgtgcct 299
||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||
Sbjct: 441 aaggaggtgtgcttgtatgtgcagaggccaggactgcgcagggctctgcggtgtgtgcct 500
Query: 300 gtgggaggagatgctgccaagctggtctttcctccaccgaagctttgcacctcaatgctg 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gtgggaggagatgctgccaagctggtctttcctccaccgaagctttgcacctcaatgctg 560
Query: 360 ctggtgagcttggtccccagcctgtcttgaggttctaatttgaga 404
||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ctgatgagcttggtccccagcctgtcttgaggttctaatttgaga 605
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 404
Length of database: 805
Length adjustment: 9
Effective length of query: 395
Effective length of database: 796
Effective search space: 314420
Effective search space used: 314420
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
