Query= MSMg01no418_g07.b1 MSMg01no418_g07.b1 CHROMAT_FILE:
MSMg01no418_g07.b1 PHD_FILE: MSMg01no418_g07.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:37:35 2005
(502 letters)
>mm_chr18_54470550_54471451
Length = 902
Score = 909 bits (470), Expect = 0.0
Identities = 494/502 (98%)
Strand = Plus / Plus
Query: 1 agaaactgtagactacatgaagaaggataaggaaaacttaactgacattttcaactctga 60
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 201 agaaactgtagactacatgaagaaggataaggaaaaattaactgacattttcaactctga 260
Query: 61 ctttccagttattgacagttacctagctaatgaagaaatcagccactcccatactagcag 120
||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cttcccagttattgacagttatctagctaatgaagaaatcagccactcccatactagcag 320
Query: 121 aaaaccagtattctgagctcggtaggacacatgaattgcatattagaatccaaaatccag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aaaaccagtattctgagctcggtaggacacatgaattgcatattagaatccaaaatccag 380
Query: 181 cccaggatcttactgatttctctgttccaaagaagtaattgactttgggtgttttccaat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cccaggatcttactgatttctctgttccaaagaagtaattgactttgggtgttttccaat 440
Query: 241 tcttgggactcaggaaacaacaacctactgctagttgaagaaagtctataagaattaagg 300
||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 441 tcttgggactcaggaaacaacaatatactgctagttgaagaaagtctataagaattaagg 500
Query: 301 accaaagtttggttgccagtattaaaatgataggatttttaccatgtaaaaagggggtga 360
|||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||
Sbjct: 501 accaaagtttggttgccagtattaaaattataggatttttatcatgtaaaaagggggtga 560
Query: 361 atgcattgaaaatcaatttcataaagtcataaaacttattaaatcttcaagactatatgg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 atgcattgaaaatcaatttcataaagtcataaaacttattaaatcttcaagactatatgg 620
Query: 421 aaatccagattcaagaaatccaagtgaacctaaataggtccaacaaaccagactttgatc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 aaatccagattcaagaaatccaagtgaacctaaataggtccaacaaaccagactttgatc 680
Query: 481 caggtatattaagaagtacaga 502
||||||||| ||||||||||||
Sbjct: 681 caggtatatgaagaagtacaga 702
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 502
Length of database: 902
Length adjustment: 10
Effective length of query: 492
Effective length of database: 892
Effective search space: 438864
Effective search space used: 438864
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no418_g07.g1 MSMg01no418_g07.g1 CHROMAT_FILE:
MSMg01no418_g07.g1 PHD_FILE: MSMg01no418_g07.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:37:35 2005
(310 letters)
>mm_chr18_54666552_54667262
Length = 711
Score = 460 bits (238), Expect = e-134
Identities = 250/254 (98%), Gaps = 1/254 (0%)
Strand = Plus / Minus
Query: 58 acacacacacacacagaggcacactcaccttaaccaagaaattattcaaattgatgcctc 117
||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||
Sbjct: 534 acacacacacacacagaggtacgctcaccttaaccaagaaattattcaaattgatgcctc 475
Query: 118 tcaggaaaggagcgatataccaatggagagtcacataatatatcagcagcactcctggca 177
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 474 tcaggaaaggagcgatataccaatggagagtcacataatatatcagcagcactcctggca 415
Query: 178 gacatcatgctctggagtagatgaccagggcaaaatgaactcactcaagagtagttggcc 237
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 414 gacatcatgctctggagtagatgaccagggcaaaatgaactcactcaagagtagttggcc 355
Query: 238 agcacatggtt-gggggggggtgctctttcttttgtttgagtattgtttttgttttattg 296
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 354 agcacatggttggggggggggtgctctttcttttgtttgagtattgtttttgttttattg 295
Query: 297 attttaaattttgt 310
| ||||||||||||
Sbjct: 294 actttaaattttgt 281
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 310
Length of database: 711
Length adjustment: 9
Effective length of query: 301
Effective length of database: 702
Effective search space: 211302
Effective search space used: 211302
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
