Query= MSMg01no419_b05.b1 MSMg01no419_b05.b1 CHROMAT_FILE:
MSMg01no419_b05.b1 PHD_FILE: MSMg01no419_b05.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:38:28 2005
(394 letters)
>mm_chr18_60543422_60544215
Length = 794
Score = 716 bits (370), Expect = 0.0
Identities = 388/394 (98%)
Strand = Plus / Minus
Query: 1 gcgtccagccccactatgtgaatatacataaaatgaataaatatatgtaataaaaatatt 60
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 543 gcgtccagccccactatgtgaatatacataaaatgaataaataaatgtaataaaaatatt 484
Query: 61 aaaatgcattgtatacaattgataaagaattactaacatgataaagaggaaaataactgc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 483 aaaatgcattgtatacaattgataaagaattactaacatgataaagaggaaaataactgc 424
Query: 121 agaaaatggtcttcaatgcctttgtgctgtgtatgaatacagcaatggagagagatggga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 423 agaaaatggtcttcaatgcctttgtgctgtgtatgaatacagcaatggagagagatggga 364
Query: 181 aataccaatccattattaatgatgaatgccttcatagcactctagttctatactaaaacc 240
||||||||||||| | || |||||||||||||||||||||| |||||||||||||||||
Sbjct: 363 aataccaatccatgaagaaggatgaatgccttcatagcactccagttctatactaaaacc 304
Query: 241 caggacattaaggaggattgctcagttaaaatgtccacagcatctactactgctgttttg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 303 caggacattaaggaggattgctcagttaaaatgtccacagcatctactactgctgttttg 244
Query: 301 gtaaatggacttgttgtcaagttgccttctgcatatttctgattatgccagagacaaggg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 243 gtaaatggacttgttgtcaagttgccttctgcatatttctgattatgccagagacaaggg 184
Query: 361 ttttgttgctgttctttgtgccccatttgctttg 394
||||||||||||||||||||||||||||||||||
Sbjct: 183 ttttgttgctgttctttgtgccccatttgctttg 150
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 394
Length of database: 794
Length adjustment: 9
Effective length of query: 385
Effective length of database: 785
Effective search space: 302225
Effective search space used: 302225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no419_b05.g1 MSMg01no419_b05.g1 CHROMAT_FILE:
MSMg01no419_b05.g1 PHD_FILE: MSMg01no419_b05.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:38:28 2005
(472 letters)
>mm_chr18_60425416_60426287
Length = 872
Score = 855 bits (442), Expect = 0.0
Identities = 465/474 (98%), Gaps = 4/474 (0%)
Strand = Plus / Plus
Query: 1 tcaaaagtatcacagggattgacaggaattgctcaggagcttcattcactcaccatatta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tcaaaagtatcacagggattgacaggaattgctcaggagcttcattcactcaccatatta 260
Query: 61 gagatataggatgttttagcctgtaatcctgctgactcagtttccctttttttttt---g 117
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 261 gagatataggatgttttagcctgtaatcctgctgactcagtttccctttttttttttttg 320
Query: 118 ttttgttttgtctttttgagacagggtttctctgtatagccctggctatccttgaactca 177
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 321 ttttgttttgtctttttgagacagggtttctctgtatagccctggctatcctggaactca 380
Query: 178 ctttggagaccaggctggcctcaaactgaactcagaaatctgcctgcctctgcctcccaa 237
|||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |
Sbjct: 381 ctttggagaccaggctggcctcgaactgaactcagaaatctgcctgcctctgcctcccga 440
Query: 238 gtgctgggattaaaggcatgtgccaccatgcccagcttcccttttttttaaatgactata 297
||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 441 gtgctgggattaaaggcatgtgccaccatgcccagcttcccttttttaaaaatgactata 500
Query: 298 tttttaggagactgggcatctgtgg-ggctattcttggttgtcaacttgactacaactga 356
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 501 tttttaggagactgggcatctgtggtggctattcttggttgtcaacttgactacaactga 560
Query: 357 aattaactataacccaagtggccgggtacaccagtgaggggttttgtttttaattaatta 416
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 aattaactataacccaagtggccgggtacaccagtgaggggttttgtttttaattaatta 620
Query: 417 aagcattttatttaagtgtgaagaccaacttttatatgtggattttatgaagtg 470
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 aagcattttatttaagtgtgaagaccaacttttatatgtggattttatgaagtg 674
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 472
Length of database: 872
Length adjustment: 10
Effective length of query: 462
Effective length of database: 862
Effective search space: 398244
Effective search space used: 398244
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
