Query= MSMg01no422_h21.b1 MSMg01no422_h21.b1 CHROMAT_FILE:
MSMg01no422_h21.b1 PHD_FILE: MSMg01no422_h21.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:42:57 2005
(553 letters)
>mm_chr18_83963294_83964246
Length = 953
Score = 1031 bits (533), Expect = 0.0
Identities = 545/549 (99%)
Strand = Plus / Minus
Query: 5 gaattcaggatttcttccactgtataaacatgtctggtctggaggtacatgcttgtaatc 64
|||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 906 gaattcaggatttcagcaactgtataaacatgtctggtctggaggtacatgcttgtaatc 847
Query: 65 ccagagctggggaggcagagacagaggaatcagtatggggctccatgcctagctagtttc 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 846 ccagagctggggaggcagagacagaggaatcagtatggggctccatgcctagctagtttc 787
Query: 125 aataactaagggagttccaagagaccctgtctctatgatgacagcaaacatttcagagaa 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 786 aataactaagggagttccaagagaccctgtctctatgatgacagcaaacatttcagagaa 727
Query: 185 actatggcagaggttgtgagtactgaggaaaccatgagttagtgagtgactttgtactgt 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 726 actatggcagaggttgtgagtactgaggaaaccatgagttagtgagtgactttgtactgt 667
Query: 245 ttgacatgggcacagcaatgtcacaagaccccagtgcctcagacctagagagtagaaaga 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 666 ttgacatgggcacagcaatgtcacaagaccccagtgcctcagacctagagagtagaaaga 607
Query: 305 ctccggaggtgaggctgagaagaacagtagaacctttttctggtctaagcatgaatgtgg 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 606 ctccggaggtgaggctgagaagaacagtagaacctttttctggtctaagcatgaatgtgg 547
Query: 365 actatcatggctattgtcctgtgggtggtcatggcctgaagatcgcttccctacagattt 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 546 actatcatggctattgtcctgtgggtggtcatggcctgaagatcgcttccctacagattt 487
Query: 425 ctcctactgagtttagctaaacctcttcctttgttcagctggatgtaataactctttcct 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 486 ctcctactgagtttagctaaacctcttcctttgttcagctggatgtaataactctttcct 427
Query: 485 ccttgcttaactgtatataataaccccattacctgtttgtttgtatgcaataactctgct 544
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 426 ccttgcttaactgtatataatgaccccattacctgtttgtttgtatgcaataactctgct 367
Query: 545 tccttggga 553
|||||||||
Sbjct: 366 tccttggga 358
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 553
Length of database: 953
Length adjustment: 10
Effective length of query: 543
Effective length of database: 943
Effective search space: 512049
Effective search space used: 512049
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no422_h21.g1 MSMg01no422_h21.g1 CHROMAT_FILE:
MSMg01no422_h21.g1 PHD_FILE: MSMg01no422_h21.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:42:57 2005
(426 letters)
>mm_chr18_83782423_83783247
Length = 825
Score = 758 bits (392), Expect = 0.0
Identities = 418/428 (97%), Gaps = 5/428 (1%)
Strand = Plus / Plus
Query: 1 ctcgcacaaaatcctgctcactaaag--ttttttttttccttcacctttgtaaatgattg 58
|||||||||||||||||||||| || |||||||||||||| |||||||||||||||||
Sbjct: 201 ctcgcacaaaatcctgctcact--agttttttttttttcctttacctttgtaaatgattg 258
Query: 59 taactaaaattagggaacagcatgtgtcagaagaactactattttctccctccttttgtc 118
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 259 taactaaaattagggaacagcatgtgtcagaagaactactattttctccctccttttgtc 318
Query: 119 ttgatttggtgaatagcaatgatgaccttgcaaaaacaagcattggtaccagaagaagtg 178
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 ttggtttggtgaatagcaatgatgaccttgcaaaaacaagcattggtaccagaagaagtg 378
Query: 179 tgaattgcaaagcacacgtcacgtgaaagtcacgatgtccccgctacatcttttaatgcc 238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 tgaattgcaaagcacacgtcacgtgaaagtcacgatgtccccgctacatcttttaatgcc 438
Query: 239 tttaagtccccttgtagtaccacaggtcaaatgtaaatttcatcgtgaaatgagattgaa 298
|||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 tttaagtccccttg-agcaccacaggtcaaatgtaaatttcatcgtgaaatgagattgaa 497
Query: 299 taaatggccaactccgtgagaaatctgtcttccttacctggctctacattgcttcctcta 358
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 498 taaatggccaactccgtgagaaatctgtcttccttacctggctctacattgcttcctcta 557
Query: 359 atcatgtttaagacaccactttctgacagtgctttcaaagaatgtttaacagagagagta 418
|||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||
Sbjct: 558 atcatgtttaagacaccactttctgacagtgccttcaaagaatgtttcacagagagagta 617
Query: 419 tcgttctc 426
||||||||
Sbjct: 618 tcgttctc 625
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 426
Length of database: 825
Length adjustment: 9
Effective length of query: 417
Effective length of database: 816
Effective search space: 340272
Effective search space used: 340272
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
